RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 DOHHQ9BU89 302 aa1.95□□□□□ -2.1
PCNX4-206ENST00000553513 FBXL12Q9NXK8 326 aa1.95□□□□□ -2.1
PCNX4-206ENST00000553513 MRPL27Q9P0M9 148 aaKnown RBP1.95□□□□□ -2.1
PCNX4-206ENST00000553513 OPTCQ9UBM4 332 aa1.95□□□□□ -2.1
PCNX4-206ENST00000553513 ZSWIM8A7E2V4 1837 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 TRAV26-2A0A0B4J265 109 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 TRGV4A0A0C4DH28 118 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 EXOC1LA0A1B0GW35 172 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 DPRXA6NFQ7 191 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 RFPL4AA6NLU0 287 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 ZNF878C9JN71 531 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 RFPL4AL1F8VTS6 287 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 J3QQQ9 107 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 HAND1O96004 215 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 C1QAP02745 245 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 SULT1A3P0DMM9 295 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 SULT1A4P0DMN0 295 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 HLA-DMBP28068 263 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 S100A5P33763 92 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 CAPZBP47756 277 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 EIF2B2P49770 351 aaKnown RBP1.94□□□□□ -2.1
PCNX4-206ENST00000553513 RAB14P61106 215 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 RPL26P61254 145 aaKnown RBP1.94□□□□□ -2.1
PCNX4-206ENST00000553513 CCL20P78556 96 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 GLO1Q04760 184 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 HACD4Q5VWC8 232 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 GNPDA2Q8TDQ7 276 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 TOMM6Q96B49 74 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 NIPSNAP1Q9BPW8 284 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 GINS4Q9BRT9 223 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 C9orf16Q9BUW7 83 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 RPL26L1Q9UNX3 145 aaKnown RBP1.94□□□□□ -2.1
PCNX4-206ENST00000553513 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 RTL1A6NKG5 1358 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 DHX57Q6P158 1386 aaKnown RBP1.94□□□□□ -2.1
PCNX4-206ENST00000553513 ABCC12Q96J65 1359 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 ZNF407Q9C0G0 2248 aa1.94□□□□□ -2.1
PCNX4-206ENST00000553513 WRNQ14191 1432 aaPredicted RBP eCLIP1.93□□□□□ -2.1
PCNX4-206ENST00000553513 hCG_1818297A0A087WSY0 165 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 FAM236DA0A1B0GTK5 79 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 A8MT66 165 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 H7C2G1 150 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 SERPINE1P05121 402 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 TFPTP0C1Z6 253 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 FAM236CP0DP71 79 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 NFYAP23511 347 aaPredicted RBP1.93□□□□□ -2.1
PCNX4-206ENST00000553513 S100A4P26447 101 aaKnown RBP1.93□□□□□ -2.1
PCNX4-206ENST00000553513 TAF1AQ15573 450 aaPredicted RBP1.93□□□□□ -2.1
PCNX4-206ENST00000553513 SPANXN3Q5MJ09 141 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 AADACL3Q5VUY0 350 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 DNAJC9Q8WXX5 260 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 Q9BRP9 147 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 C11orf68Q9H3H3 251 aaKnown RBP1.93□□□□□ -2.1
PCNX4-206ENST00000553513 CISHQ9NSE2 258 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 SLC39A9Q9NUM3 307 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 C14orf105Q9NVL8 296 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 SAMHD1Q9Y3Z3 626 aaKnown RBP1.93□□□□□ -2.1
PCNX4-206ENST00000553513 TIMM22Q9Y584 194 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 SHANK3Q9BYB0 1731 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 NUP155O75694 1391 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 MTUS2Q5JR59 1369 aa1.93□□□□□ -2.1
PCNX4-206ENST00000553513 SIPA1L1O43166 1804 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 ITGB4P16144 1822 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 TRAV7A0A075B6U4 112 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 MUC21A0A0G2JKD1 596 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 MUC21A0A140T8X8 626 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 LY6LH3BQJ8 138 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 IGHV3-7P01780 117 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 C8GP07360 202 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 LGALS1P09382 135 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 LGALS3P17931 250 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 CSRP1P21291 193 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 PPIBP23284 216 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 ERP29P30040 261 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 RPL28P46779 137 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 RPS20P60866 119 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 RELAQ04206 551 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 NDUFA5Q16718 116 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 ZNF181Q2M3W8 571 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 IBA57Q5T440 356 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 S100A7AQ86SG5 101 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 TMEM86AQ8N2M4 240 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 RPP25LQ8N5L8 163 aaKnown RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 PXT1Q8NFP0 134 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 OR13C4Q8NGS5 318 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 TSPAN32Q96QS1 320 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 ZNF471Q9BX82 626 aaPredicted RBP1.92□□□□□ -2.1
PCNX4-206ENST00000553513 UQCC1Q9NVA1 299 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 MYO9BQ13459 2157 aa1.92□□□□□ -2.1
PCNX4-206ENST00000553513 ARRDC5A6NEK1 342 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 E5RI56 91 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 C3orf84H3BNL1 204 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 J3QRK9 145 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 PPBPP02775 128 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 CST2P09228 141 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 RPS4Y1P22090 263 aaKnown RBP1.91□□□□□ -2.1
PCNX4-206ENST00000553513 RPL19P84098 196 aaKnown RBP1.91□□□□□ -2.1
PCNX4-206ENST00000553513 TEX36Q5VZQ5 186 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 TMED4Q7Z7H5 227 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms