RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 SEC22AQ96IW7 307 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 OR5B12Q96R08 314 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 PRR25Q96S07 402 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 TSC22D3Q99576 134 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
CHMP1A-206ENST00000549139 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 C13orf42A0A1B0GVH6 325 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 A6NHS1 94 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 SNAPC5O75971 98 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 CRYGCP07315 174 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 OR8U8P0C7N1 319 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 MYOD1P15172 320 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 TP53RKQ96S44 253 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 SRSF8Q9BRL6 282 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 MCUBQ9NWR8 336 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
CHMP1A-206ENST00000549139 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 IGHV3-11P01762 117 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 UCP1P25874 307 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 PSMB6P28072 239 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 KLK9Q2XQG4 91 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 H2BFWTQ7Z2G1 175 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 OR1L8Q8NGR8 309 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 KRTAP17-1Q9BYP8 105 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 KLK9Q9UKQ9 250 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
CHMP1A-206ENST00000549139 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 LINC01619G3V211 115 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 ATG12O94817 140 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 DHFRP00374 187 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 TRAPPC2P0DI81 140 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 TRAPPC2BP0DI82 140 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 AREGP15514 252 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 CTRB1P17538 263 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 RAB25P57735 213 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 ZNF45Q02386 682 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 CTRB2Q6GPI1 263 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 ZNF343Q6P1L6 599 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 HSD17B13Q7Z5P4 300 aaPredicted RBP12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 NSG2Q9Y328 171 aa12.09□□□□□ -0.47
CHMP1A-206ENST00000549139 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 A0A087WW49 117 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 TEX13DA0A0J9YY54 714 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 CRYM-AS1A6NIL9 109 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 RBMXL2O75526 392 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 PRH1P02810 166 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 RHOGP84095 191 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 DHODHQ02127 395 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 BAK1Q16611 211 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 SP6Q3SY56 376 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 LINC00299Q6ZSB3 139 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 NECAP1Q8NC96 275 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 OR5B3Q8NH48 314 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 GLYATL2Q8WU03 294 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 RANGRFQ9HD47 186 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.48
CHMP1A-206ENST00000549139 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 CDS2O95674 445 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 OR5AC1P0C628 307 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 TRIM16LQ309B1 348 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 ZNF57Q68EA5 555 aaPredicted RBP12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 SGPP2Q8IWX5 399 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 OR4A16Q8NH70 328 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 KCNIP3Q9Y2W7 256 aa12.07□□□□□ -0.48
CHMP1A-206ENST00000549139 DBX1A6NMT0 343 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 OR2J3O76001 311 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 P0C879 139 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 LYL1P12980 280 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 INPP1P49441 399 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 DEFA5Q01523 94 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 OR10W1Q8NGF6 305 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 DCUN1D4Q92564 292 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 DLX4Q92988 240 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
CHMP1A-206ENST00000549139 TMEM56Q96MV1 263 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms