RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 UPK1BO75841 260 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 ANXA3P12429 323 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 CTRB1P17538 263 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 UBE2MP61081 183 aaKnown RBP17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 CTRB2Q6GPI1 263 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 ETV3LQ6ZN32 361 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 C8orf86Q6ZUL3 223 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 GNB4Q9HAV0 340 aa17.04■□□□□ 0.32
RHBDL3-204ENST00000538145 TRBV9A0A0B4J1U6 114 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 NUDT19A8MXV4 375 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 TRGV3P03979 118 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 TRAPPC2P0DI81 140 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 TRAPPC2BP0DI82 140 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 AREGP15514 252 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 PSMB6P28072 239 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 TPPP2P59282 170 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 SRPXP78539 464 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 TMEM268Q5VZI3 342 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 OR4A16Q8NH70 328 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 LSM10Q969L4 123 aaKnown RBP17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 RRNAD1Q96FB5 475 aaKnown RBP17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 MS4A10Q96PG2 267 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 COA4Q9NYJ1 87 aa17.03■□□□□ 0.32
RHBDL3-204ENST00000538145 A0A0B4J293 547 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 PIGBOS1A0A0B4J2F0 54 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 A0A0G2JRQ6 117 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 I3L521 148 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 AARDQ4LEZ3 155 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 P2RX4Q99571 388 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 ZNF355PQ9NSJ1 428 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 TBC1D24Q9ULP9 559 aa17.02■□□□□ 0.32
RHBDL3-204ENST00000538145 A0A0G2JLM5 398 aa17.01■□□□□ 0.31
RHBDL3-204ENST00000538145 MYCNOSP40205 109 aa17.01■□□□□ 0.31
RHBDL3-204ENST00000538145 HSPE1P61604 102 aaKnown RBP17.01■□□□□ 0.31
RHBDL3-204ENST00000538145 ASAH1Q13510 395 aa17.01■□□□□ 0.31
RHBDL3-204ENST00000538145 IZUMO4Q1ZYL8 232 aa17.01■□□□□ 0.31
RHBDL3-204ENST00000538145 LRTM2Q8N967 370 aa17.01■□□□□ 0.31
RHBDL3-204ENST00000538145 A0A0B4J2A0 478 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 SFT2D2O95562 160 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 LGALS1P09382 135 aaKnown RBP17■□□□□ 0.31
RHBDL3-204ENST00000538145 IFITM3Q01628 133 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 WT1-ASQ06250 92 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 PPP1R1AQ13522 171 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 FHL3Q13643 280 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 LGI3Q8N145 548 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 SLC35G3Q8N808 338 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 WFDC9Q8NEX5 89 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 OR10W1Q8NGF6 305 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 RAX2Q96IS3 184 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 USMG5Q96IX5 58 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 SHPKQ9UHJ6 478 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 FLVCR2Q9UPI3 526 aa17■□□□□ 0.31
RHBDL3-204ENST00000538145 DUXBA0A1W2PPF3 345 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 FAM223BA6NKX1 122 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 RBMXL2O75526 392 aaKnown RBP16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 DHFRP00374 187 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 PRCDQ00LT1 54 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 Q6ZRM9 215 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 FAM223AQ8IWN6 122 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 FANCD2OSQ96PS1 177 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 PRR13Q9NZ81 148 aa16.99■□□□□ 0.31
RHBDL3-204ENST00000538145 INS-IGF2F8WCM5 200 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 CCL24O00175 119 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 PF4P02776 101 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 TCRBP04435 133 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 VAMP1P23763 118 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 NMSQ5H8A3 153 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 LINC00482Q8N8I6 264 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 NECAP1Q8NC96 275 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 RNASE11Q8TAA1 199 aaKnown RBP16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 GPR146Q96CH1 333 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 ALX4Q9H161 411 aaPredicted RBP16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 NOTCH3Q9UM47 2321 aa16.98■□□□□ 0.31
RHBDL3-204ENST00000538145 IGLV11-55A0A075B6I3 123 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 PRH1P02810 166 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 HIST1H1BP16401 226 aaKnown RBP16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 RHOGP84095 191 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 DEFB136Q30KP8 78 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 MZT2BQ6NZ67 158 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 MRPL41Q8IXM3 137 aaKnown RBP16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 OR52E5Q8NH55 327 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 C20orf85Q9H1P6 137 aa16.97■□□□□ 0.31
RHBDL3-204ENST00000538145 C13orf42A0A1B0GVH6 325 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 C9orf170A2RU37 121 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 ST8SIA3O43173 380 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 REG1AP05451 166 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 OR4E1P0C645 316 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 OR13C7P0DN81 318 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 MECP2P51608 486 aaKnown RBP16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 ANKRD55Q3KP44 614 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 PDLIM3Q53GG5 364 aaPredicted RBP16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 ZNF343Q6P1L6 599 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 C19orf35Q6ZS72 473 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 LYZL2Q7Z4W2 148 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 OR11H1Q8NG94 326 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 HINT2Q9BX68 163 aa16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.96■□□□□ 0.31
RHBDL3-204ENST00000538145 IGHV3-11P01762 117 aa16.96■□□□□ 0.3
RHBDL3-204ENST00000538145 ANXA7P20073 488 aaKnown RBP16.96■□□□□ 0.3
RHBDL3-204ENST00000538145 OR2C3Q8N628 320 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms