RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ZBTB25P24278 435 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 LGALS7P47929 136 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 ARPC4P59998 168 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 PSG5Q15238 335 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
CAPN1-223ENST00000533079 ZFP69Q49AA0 526 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 TMEM128Q5BJH2 165 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 RPP25LQ8N5L8 163 aaKnown RBP9.37□□□□□ -0.91
CAPN1-223ENST00000533079 BVESQ8NE79 360 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 MRPL30Q8TCC3 161 aaKnown RBP9.37□□□□□ -0.91
CAPN1-223ENST00000533079 DYNLRB2Q8TF09 96 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 ZC4H2Q9NQZ6 224 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 SHPKQ9UHJ6 478 aa9.37□□□□□ -0.91
CAPN1-223ENST00000533079 TRDCB7Z8K6 153 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 ITGB1BP1O14713 200 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 TNFRSF9Q07011 255 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 FXYD3Q14802 87 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 HMGN3Q15651 99 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 FAM209BQ5JX69 171 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 MOB1BQ7L9L4 216 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 LYG2Q86SG7 212 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 NOXA1Q86UR1 476 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 ZFAND1Q8TCF1 268 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 HYLS1Q96M11 299 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 FYTTD1Q96QD9 318 aaKnown RBP9.36□□□□□ -0.91
CAPN1-223ENST00000533079 CLCC1Q96S66 551 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 SEC22CQ9BRL7 303 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 OVOL2Q9BRP0 275 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 HDHD3Q9BSH5 251 aaPredicted RBP9.36□□□□□ -0.91
CAPN1-223ENST00000533079 GGTLC1Q9BX51 225 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 TP53TG1Q9Y2A0 90 aa9.36□□□□□ -0.91
CAPN1-223ENST00000533079 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-223ENST00000533079 GIPP09681 153 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-223ENST00000533079 GSTT2P0CG29 244 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 CXCL3P19876 107 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 RAP2BP61225 183 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 DHRS2Q13268 280 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 C4orf46Q504U0 113 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 RPL39P5Q59GN2 51 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 LPCAT3Q6P1A2 487 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 PDPNQ86YL7 162 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 WFDC3Q8IUB2 231 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 C12orf45Q8N5I9 185 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-223ENST00000533079 MITD1Q8WV92 249 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 EDARADDQ8WWZ3 215 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 RTBDNQ9BSG5 229 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF436Q9C0F3 470 aaPredicted RBP9.35□□□□□ -0.91
CAPN1-223ENST00000533079 WFDC10AQ9H1F0 79 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
CAPN1-223ENST00000533079 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
CAPN1-223ENST00000533079 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 C9orf170A2RU37 121 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 FAM223BA6NKX1 122 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF785A8K8V0 405 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 FABP7O15540 132 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 FAM223AQ8IWN6 122 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 TMEM217Q8N7C4 229 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 OR4A4PQ8NGN8 299 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 MARCH1Q8TCQ1 289 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 MOB3AQ96BX8 217 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF486Q96H40 463 aaPredicted RBP9.34□□□□□ -0.91
CAPN1-223ENST00000533079 CYYR1Q96J86 154 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 ZNF2Q9BSG1 426 aaPredicted RBP9.34□□□□□ -0.91
CAPN1-223ENST00000533079 CHMP1AQ9HD42 196 aaPredicted RBP9.34□□□□□ -0.91
CAPN1-223ENST00000533079 DNAH10Q8IVF4 4471 aa9.34□□□□□ -0.91
CAPN1-223ENST00000533079 TNCP24821 2201 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 LOC102724200A0A096LPH7 203 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-223ENST00000533079 DBX1A6NMT0 343 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 TUSC2O75896 110 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 APOA2P02652 100 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 IGKV1-16P04430 117 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 SSBP2P81877 361 aaPredicted RBP9.33□□□□□ -0.92
CAPN1-223ENST00000533079 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 DEFB114Q30KQ6 69 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 TMED4Q7Z7H5 227 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 IL1F10Q8WWZ1 152 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 MAFIPQ8WZ33 124 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 PHB2Q99623 299 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 AGMATQ9BSE5 352 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 CABLES2Q9BTV7 478 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 MGAT4CQ9UBM8 478 aa9.33□□□□□ -0.92
CAPN1-223ENST00000533079 C14orf166Q9Y224 244 aaKnown RBP9.33□□□□□ -0.92
CAPN1-223ENST00000533079 RYR1P21817 5038 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 TRBV6-7A0A0A0MS04 114 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 BMPR1BO00238 502 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 DEDDO75618 318 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 SFT2D2O95562 160 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 HLA-AP01891 365 aaKnown RBP9.32□□□□□ -0.92
CAPN1-223ENST00000533079 FCGR2CP31995 323 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms