RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 AREGP15514 252 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 RIPPLY3P57055 190 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 HSPE1P61604 102 aaKnown RBP10.77□□□□□ -0.69
CD44-224ENST00000526669 FOXL1Q12952 345 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 IAH1Q2TAA2 248 aaPredicted RBP10.77□□□□□ -0.69
CD44-224ENST00000526669 AWAT1Q58HT5 328 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 CENPVQ7Z7K6 275 aaPredicted RBP10.77□□□□□ -0.69
CD44-224ENST00000526669 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 TMEM158Q8WZ71 300 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 SPIN2AQ99865 258 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 SPIN2BQ9BPZ2 258 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 FKBP11Q9NYL4 201 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 STAB1Q9NY15 2570 aa10.77□□□□□ -0.69
CD44-224ENST00000526669 PIGBOS1A0A0B4J2F0 54 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 SCGB1D2O95969 90 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 IGF1P05019 195 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 FGF2P09038 288 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 HOXA1P49639 335 aaPredicted RBP10.76□□□□□ -0.69
CD44-224ENST00000526669 CRIP2P52943 208 aaPredicted RBP10.76□□□□□ -0.69
CD44-224ENST00000526669 PRCDQ00LT1 54 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 DEFA5Q01523 94 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 ZNF429Q86V71 674 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 C11orf44Q8N8P7 122 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 ZBTB8BQ8NAP8 495 aaPredicted RBP10.76□□□□□ -0.69
CD44-224ENST00000526669 MAGT1Q9H0U3 335 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 GSKIPQ9P0R6 139 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 MGAT4CQ9UBM8 478 aa10.76□□□□□ -0.69
CD44-224ENST00000526669 IGLC7A0M8Q6 106 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 CEBPZOSA8MTT3 80 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 SOX15O60248 233 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 PITX3O75364 302 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 PRH1P02810 166 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 PROK1P58294 105 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 KRTAP10-3P60369 221 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 TMEM267Q0VDI3 215 aaPredicted RBP10.75□□□□□ -0.69
CD44-224ENST00000526669 C19orf54Q5BKX5 351 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 CXorf66Q5JRM2 361 aaPredicted RBP10.75□□□□□ -0.69
CD44-224ENST00000526669 GSG1LQ6UXU4 331 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 OR5B3Q8NH48 314 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 WNT10AQ9GZT5 417 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 MED28Q9H204 178 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 RBKSQ9H477 322 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 COA4Q9NYJ1 87 aa10.75□□□□□ -0.69
CD44-224ENST00000526669 OR13C7P0DN81 318 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 IAPPP10997 89 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 SLC25A6P12236 298 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 SPCS3P61009 180 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 SLC35B1P78383 322 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 CFHR3Q02985 330 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 WT1-ASQ06250 92 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 TNFRSF9Q07011 255 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 SRSF4Q08170 494 aaKnown RBP10.74□□□□□ -0.69
CD44-224ENST00000526669 FCN2Q15485 313 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 OR5AU1Q8NGC0 362 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 OR4D5Q8NGN0 318 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 FAM110DQ8TAY7 271 aaPredicted RBP10.74□□□□□ -0.69
CD44-224ENST00000526669 WDR89Q96FK6 387 aaPredicted RBP10.74□□□□□ -0.69
CD44-224ENST00000526669 MS4A10Q96PG2 267 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 ENY2Q9NPA8 101 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
CD44-224ENST00000526669 hCG_2014768A0A024R1R8 64 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 A0A1B0GUS0 222 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 PF4V1P10720 104 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 CD28P10747 220 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 PSMB6P28072 239 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 PPIFP30405 207 aaKnown RBP10.73□□□□□ -0.69
CD44-224ENST00000526669 AARDQ4LEZ3 155 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 HSPB7Q9UBY9 170 aa10.73□□□□□ -0.69
CD44-224ENST00000526669 FBXO24O75426 580 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 CTRB1P17538 263 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 CXCL3P19876 107 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 NKX2-1P43699 371 aaPredicted RBP10.72□□□□□ -0.69
CD44-224ENST00000526669 RRAS2P62070 204 aaPredicted RBP10.72□□□□□ -0.69
CD44-224ENST00000526669 POLR2GP62487 172 aaKnown RBP eCLIP10.72□□□□□ -0.69
CD44-224ENST00000526669 KHDC1LQ5JSQ8 128 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 CTRB2Q6GPI1 263 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 Q6ZNX1 250 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 TTC9CQ8N5M4 171 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 OR11H7Q8NGC8 314 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 OR52E5Q8NH55 327 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 DTD1Q8TEA8 209 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 WIPF2Q8TF74 440 aaPredicted RBP10.72□□□□□ -0.69
CD44-224ENST00000526669 WFDC12Q8WWY7 111 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 MDFIQ99750 246 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 GON7Q9BXV9 100 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 HEYLQ9NQ87 328 aaPredicted RBP10.72□□□□□ -0.69
CD44-224ENST00000526669 ZNF580Q9UK33 172 aa10.72□□□□□ -0.69
CD44-224ENST00000526669 RCL1Q9Y2P8 373 aaKnown RBP10.72□□□□□ -0.69
CD44-224ENST00000526669 LSM5Q9Y4Y9 91 aaKnown RBP10.72□□□□□ -0.69
CD44-224ENST00000526669 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 WRBO00258 174 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 SSSCA1O60232 199 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 IGHG4P01861 327 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms