RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 HLA-DRB5Q30154 266 aa2.55□□□□□ -2
CD44-217ENST00000525348 TMEM52BQ4KMG9 183 aa2.55□□□□□ -2
CD44-217ENST00000525348 TP53I3Q53FA7 332 aa2.55□□□□□ -2
CD44-217ENST00000525348 DCST2Q5T1A1 773 aa2.55□□□□□ -2
CD44-217ENST00000525348 LCE1CQ5T751 118 aa2.55□□□□□ -2
CD44-217ENST00000525348 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
CD44-217ENST00000525348 C1orf195Q5TG92 126 aa2.55□□□□□ -2
CD44-217ENST00000525348 TEX36Q5VZQ5 186 aa2.55□□□□□ -2
CD44-217ENST00000525348 Q5XG85 94 aa2.55□□□□□ -2
CD44-217ENST00000525348 CNIH2Q6PI25 160 aa2.55□□□□□ -2
CD44-217ENST00000525348 IGFL3Q6UXB1 125 aa2.55□□□□□ -2
CD44-217ENST00000525348 BCORQ6W2J9 1755 aa2.55□□□□□ -2
CD44-217ENST00000525348 HIST2H3AQ71DI3 136 aa2.55□□□□□ -2
CD44-217ENST00000525348 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.55□□□□□ -2
CD44-217ENST00000525348 OR2T33Q8NG76 320 aa2.55□□□□□ -2
CD44-217ENST00000525348 HIST1H2ACQ93077 130 aa2.55□□□□□ -2
CD44-217ENST00000525348 ELSPBP1Q96BH3 223 aa2.55□□□□□ -2
CD44-217ENST00000525348 DIRAS2Q96HU8 199 aa2.55□□□□□ -2
CD44-217ENST00000525348 DEFB118Q96PH6 123 aa2.55□□□□□ -2
CD44-217ENST00000525348 OR2A7Q96R45 310 aa2.55□□□□□ -2
CD44-217ENST00000525348 LINC01587Q99440 93 aa2.55□□□□□ -2
CD44-217ENST00000525348 HSD17B10Q99714 261 aaKnown RBP2.55□□□□□ -2
CD44-217ENST00000525348 SPIN2AQ99865 258 aa2.55□□□□□ -2
CD44-217ENST00000525348 GABRG3Q99928 467 aa2.55□□□□□ -2
CD44-217ENST00000525348 SPIN2BQ9BPZ2 258 aa2.55□□□□□ -2
CD44-217ENST00000525348 TSSK6Q9BXA6 273 aa2.55□□□□□ -2
CD44-217ENST00000525348 SLC17A9Q9BYT1 436 aa2.55□□□□□ -2
CD44-217ENST00000525348 POLR2J3Q9H1A7 115 aaKnown RBP2.55□□□□□ -2
CD44-217ENST00000525348 ATG5Q9H1Y0 275 aa2.55□□□□□ -2
CD44-217ENST00000525348 NMRAL1Q9HBL8 299 aa2.55□□□□□ -2
CD44-217ENST00000525348 MMP26Q9NRE1 261 aa2.55□□□□□ -2
CD44-217ENST00000525348 PRTFDC1Q9NRG1 225 aa2.55□□□□□ -2
CD44-217ENST00000525348 ZNF586Q9NXT0 402 aa2.55□□□□□ -2
CD44-217ENST00000525348 FKBP11Q9NYL4 201 aa2.55□□□□□ -2
CD44-217ENST00000525348 TAS2R8Q9NYW2 309 aa2.55□□□□□ -2
CD44-217ENST00000525348 CCDC88CQ9P219 2028 aa2.55□□□□□ -2
CD44-217ENST00000525348 ANXA10Q9UJ72 324 aa2.55□□□□□ -2
CD44-217ENST00000525348 HIGD1AQ9Y241 93 aa2.55□□□□□ -2
CD44-217ENST00000525348 ZNF780BQ9Y6R6 833 aa2.55□□□□□ -2
CD44-217ENST00000525348 SCN9AQ15858 1988 aa2.54□□□□□ -2
CD44-217ENST00000525348 DENND4CQ5VZ89 1909 aa2.54□□□□□ -2
CD44-217ENST00000525348 ALPK3Q96L96 1907 aa2.54□□□□□ -2
CD44-217ENST00000525348 PDCD11Q14690 1871 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 ARFGEF2Q9Y6D5 1785 aa2.54□□□□□ -2
CD44-217ENST00000525348 TJP1Q07157 1748 aa2.54□□□□□ -2
CD44-217ENST00000525348 IGHV2-26A0A0B4J1V2 119 aa2.54□□□□□ -2
CD44-217ENST00000525348 TRAV8-6A0A0B4J262 113 aa2.54□□□□□ -2
CD44-217ENST00000525348 hADV38S2A0JD32 116 aa2.54□□□□□ -2
CD44-217ENST00000525348 PINLYPA6NC86 204 aa2.54□□□□□ -2
CD44-217ENST00000525348 FAM166BA8MTA8 275 aa2.54□□□□□ -2
CD44-217ENST00000525348 BTNL10A8MVZ5 291 aa2.54□□□□□ -2
CD44-217ENST00000525348 E7EQ34 232 aa2.54□□□□□ -2
CD44-217ENST00000525348 H0YL77 283 aa2.54□□□□□ -2
CD44-217ENST00000525348 H7C1C5 153 aa2.54□□□□□ -2
CD44-217ENST00000525348 TRAPPC6AO75865 159 aa2.54□□□□□ -2
CD44-217ENST00000525348 DIRAS1O95057 198 aa2.54□□□□□ -2
CD44-217ENST00000525348 REG1AP05451 166 aa2.54□□□□□ -2
CD44-217ENST00000525348 CSN2P05814 226 aa2.54□□□□□ -2
CD44-217ENST00000525348 DBIP07108 87 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 CXCL1P09341 107 aa2.54□□□□□ -2
CD44-217ENST00000525348 AKAIN1P0CW23 69 aa2.54□□□□□ -2
CD44-217ENST00000525348 ERGP11308 486 aa2.54□□□□□ -2
CD44-217ENST00000525348 CPMP14384 443 aa2.54□□□□□ -2
CD44-217ENST00000525348 PGCP20142 388 aa2.54□□□□□ -2
CD44-217ENST00000525348 NTF3P20783 257 aa2.54□□□□□ -2
CD44-217ENST00000525348 GADD45AP24522 165 aa2.54□□□□□ -2
CD44-217ENST00000525348 CD34P28906 385 aa2.54□□□□□ -2
CD44-217ENST00000525348 BTCP35070 178 aa2.54□□□□□ -2
CD44-217ENST00000525348 G6PCP35575 357 aa2.54□□□□□ -2
CD44-217ENST00000525348 RPS10P46783 165 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 OR1E2P47887 323 aa2.54□□□□□ -2
CD44-217ENST00000525348 KLK7P49862 253 aa2.54□□□□□ -2
CD44-217ENST00000525348 CLDN6P56747 220 aa2.54□□□□□ -2
CD44-217ENST00000525348 RPS23P62266 143 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 RPL31P62899 125 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 PSG9Q00887 426 aa2.54□□□□□ -2
CD44-217ENST00000525348 AKR1C1Q04828 323 aa2.54□□□□□ -2
CD44-217ENST00000525348 CD164Q04900 197 aa2.54□□□□□ -2
CD44-217ENST00000525348 PNOCQ13519 176 aa2.54□□□□□ -2
CD44-217ENST00000525348 GINS1Q14691 196 aa2.54□□□□□ -2
CD44-217ENST00000525348 BCL2L15Q5TBC7 163 aa2.54□□□□□ -2
CD44-217ENST00000525348 AADACL3Q5VUY0 350 aa2.54□□□□□ -2
CD44-217ENST00000525348 ZNF57Q68EA5 555 aaPredicted RBP2.54□□□□□ -2
CD44-217ENST00000525348 SLC25A48Q6ZT89 311 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 GTF2H5Q6ZYL4 71 aa2.54□□□□□ -2
CD44-217ENST00000525348 MOB1BQ7L9L4 216 aa2.54□□□□□ -2
CD44-217ENST00000525348 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.54□□□□□ -2
CD44-217ENST00000525348 SUMF2Q8NBJ7 301 aa2.54□□□□□ -2
CD44-217ENST00000525348 OR5D16Q8NGK9 328 aa2.54□□□□□ -2
CD44-217ENST00000525348 OR2T35Q8NGX2 323 aa2.54□□□□□ -2
CD44-217ENST00000525348 OR2G3Q8NGZ4 309 aa2.54□□□□□ -2
CD44-217ENST00000525348 TMEM37Q8WXS4 190 aa2.54□□□□□ -2
CD44-217ENST00000525348 DDIT4LQ96D03 193 aa2.54□□□□□ -2
CD44-217ENST00000525348 WDR61Q9GZS3 305 aaKnown RBP2.54□□□□□ -2
CD44-217ENST00000525348 COA1Q9GZY4 146 aa2.54□□□□□ -2
CD44-217ENST00000525348 IFI27L2Q9H2X8 130 aa2.54□□□□□ -2
CD44-217ENST00000525348 HES4Q9HCC6 221 aa2.54□□□□□ -2
CD44-217ENST00000525348 SH2D2AQ9NP31 389 aa2.54□□□□□ -2
CD44-217ENST00000525348 SPANXB1Q9NS25 103 aaPredicted RBP2.54□□□□□ -2
CD44-217ENST00000525348 RBM22Q9NW64 420 aaKnown RBP eCLIP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms