RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 NDUFB11Q9NX14 153 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 OR1A1Q9P1Q5 309 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 UQCR10Q9UDW1 63 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 MEGF11A6BM72 1044 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 VENTXO95231 258 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 HTR1FP30939 366 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 EFNB1P98172 346 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 ZNF85Q03923 595 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 EFNB3Q15768 340 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 ZNF429Q86V71 674 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 OR5AP2Q8NGF4 316 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 GPX8Q8TED1 209 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 EMG1Q92979 244 aaKnown RBP6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 LEAP2Q969E1 77 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 TMEM106AQ96A25 262 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 SLC25A21Q9BQT8 299 aaPredicted RBP6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 SLC25A19Q9HC21 320 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 DHDHQ9UQ10 334 aa6.53□□□□□ -1.36
LIMCH1-219ENST00000514096 IGLV3-9A0A075B6K5 115 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 A0A1B0GUS0 222 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 CYB5AP00167 134 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 IGHV4-38-2P0DP08 117 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 FGF12P61328 243 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 SPATA31B1PQ5VZV4 182 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 ZNF626Q68DY1 528 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 WDR86Q86TI4 376 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 PRIMA1Q86XR5 153 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 LINC01356Q8N9X3 169 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 OR10X1Q8NGY0 326 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 OR51F2Q8NH61 342 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 OR5AK2Q8NH90 309 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 PELI1Q96FA3 418 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 ASCL2Q99929 193 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 SLC35B3Q9H1N7 401 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 BANF2Q9H503 90 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 HSPB8Q9UJY1 196 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 A0A1W2PP11 408 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 NPIPB13A6NJU9 1138 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 NPIPB4C9JG80 1138 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 TMEM178BH3BS89 294 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 M0R1X1 148 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 SDCBPO00560 298 aaPredicted RBP6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 TACSTD2P09758 323 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 CCL3L1P16619 93 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 TAS2R30P59541 319 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 RPL7L1Q6DKI1 246 aaKnown RBP6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 RPL22L1Q6P5R6 122 aaKnown RBP6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 GCSAMQ8N6F7 178 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 TCTEX1D1Q8N7M0 179 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 OR4X1Q8NH49 305 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 CXXC4Q9H2H0 198 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 TMED3Q9Y3Q3 217 aa6.52□□□□□ -1.37
LIMCH1-219ENST00000514096 NDUFB3O43676 98 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 OR7C1O76099 320 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 GNG3P63215 75 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PCK2Q16822 640 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 C12orf73Q69YU5 71 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 SFXN4Q6P4A7 337 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 CHST4Q8NCG5 386 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PECRQ9BY49 303 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 CST11Q9H112 138 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 TAS2R4Q9NYW5 299 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 KIAA1456Q9P272 454 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 hCG_38984A0A1B0GV85 526 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PLXNB1O43157 2135 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 NUDT3O95989 172 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 AMY2AP04746 511 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PNRC1Q12796 327 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 ZNF627Q7L945 461 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 SSX8Q7RTT4 187 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 MTURNQ8N3F0 131 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 OR4K15Q8NH41 348 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 MALSU1Q96EH3 234 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 UBE2J1Q9Y385 318 aaPredicted RBP6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 HILPDAQ9Y5L2 63 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 R4GMQ9 66 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 ADH4P08319 380 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 MDH2P40926 338 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 LMO4P61968 165 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 ELOBQ15370 118 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 MBNL2Q5VZF2 373 aaKnown RBP6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 FBXW12Q6X9E4 464 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 MBD6Q96DN6 1003 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PARLQ9H300 379 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PSG11Q9UQ72 335 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 PSG8Q9UQ74 426 aa6.51□□□□□ -1.37
LIMCH1-219ENST00000514096 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 MPZL2O60487 215 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 HLA-DQB1P01920 261 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 AKAIN1P0CW23 69 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 FUT3P21217 361 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 IER3P46695 156 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 EMP1P54849 157 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 TAS2R43P59537 309 aa6.5□□□□□ -1.37
LIMCH1-219ENST00000514096 HSD52Q0P140 79 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms