RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ARHGAP32A7KAX9 2087 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 NUP155O75694 1391 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 KIF14Q15058 1648 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 NSA2O95478 260 aaKnown RBP2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 HLA-DRB1P01911 266 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 C1QAP02745 245 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 GZMHP20718 246 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 ARF6P62330 175 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 RPL30P62888 115 aaKnown RBP2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 DYNAPQ8N1N2 210 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 OR4X1Q8NH49 305 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 BORCS7Q96B45 105 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 DNAJC30Q96LL9 226 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 CMTM6Q9NX76 183 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 ZMYM4Q5VZL5 1548 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 ZFYVE16Q7Z3T8 1539 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 TROQ12816 1431 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 ROCK1Q13464 1354 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 CACNA1GO43497 2377 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 CFAP74Q9C0B2 1584 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 A0A0J9YY10 115 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 A0A1B0GX78 115 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 C2orf74A8MZ97 194 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 CA5AP35218 305 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 RPL5P46777 297 aaKnown RBP2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 RAB13P51153 203 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 AP1S1P61966 158 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 SPA17Q15506 151 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 GRK1Q15835 563 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 PABPC1L2AQ5JQF8 200 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 Q6ZS49 121 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 LHFPL1Q86WI0 220 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 TBC1D19Q8N5T2 526 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 FGF13Q92913 245 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 ERMAPQ96PL5 475 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 TSPAN32Q96QS1 320 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 CXCL16Q9H2A7 254 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 PRTFDC1Q9NRG1 225 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 ARHGEF12Q9NZN5 1544 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 SCN9AQ15858 1988 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 TCOF1Q13428 1488 aaKnown RBP2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 MAGI2Q86UL8 1455 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 NAIPQ13075 1403 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 TRAPPC8Q9Y2L5 1435 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
HMGB1P47-201ENST00000511281 SLX4Q8IY92 1834 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 ARHGAP5Q13017 1502 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 EHBP1L1Q8N3D4 1523 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 LRRIQ1Q96JM4 1722 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 TRBV20OR9-2A0A075B6H5 130 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 A0A0J9YW62 118 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 LY6LH3BQJ8 138 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 FAAHO00519 579 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 TXNDC9O14530 226 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 CNIH1O95406 144 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 ZNF705DP0CH99 300 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 CBR1P16152 277 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 CCL20P78556 96 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 OR8B12Q8NGG6 310 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 MRPL30Q8TCC3 161 aaKnown RBP2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 KLK6Q92876 244 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 PAIP2Q9BPZ3 127 aaKnown RBP2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 CISHQ9NSE2 258 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 PRO2289Q9P1D8 64 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 PKIGQ9Y2B9 76 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 PRELID3BQ9Y3B1 194 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 RBM7Q9Y580 266 aaKnown RBP2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 ABCC5O15440 1437 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 KDM5CP41229 1560 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 DIP2CQ9Y2E4 1556 aa2.49□□□□□ -2.01
HMGB1P47-201ENST00000511281 ZNF518AQ6AHZ1 1483 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 TMEM269A0A1B0GVZ9 245 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 OR4C46A6NHA9 309 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 I3L521 148 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 CSN1S1P47710 185 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 AGTRAPQ6RW13 159 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 SLC35F6Q8N357 371 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 NIPSNAP1Q9BPW8 284 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 TRIM4Q9C037 500 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 C20orf27Q9GZN8 174 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 WDR61Q9GZS3 305 aaKnown RBP2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 EFCAB1Q9HAE3 211 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 PAQR5Q9NXK6 330 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 IDI2-AS1Q9NZ38 188 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 ABCA6Q8N139 1617 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 CCDC144AA2RUR9 1427 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 MYO5CQ9NQX4 1742 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 TONSLQ96HA7 1378 aa2.48□□□□□ -2.01
HMGB1P47-201ENST00000511281 ABCC1P33527 1531 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 MLH3Q9UHC1 1453 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 PREX2Q70Z35 1606 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 ICE1Q9Y2F5 2266 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 STRCQ7RTU9 1775 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 TRAV26-2A0A0B4J265 109 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 LEPROTO15243 131 aa2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 NOS1APO75052 506 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P47-201ENST00000511281 CST2P09228 141 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms