RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CADP27708 2225 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 TNRC18O15417 2968 aaPredicted RBP6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PRR19A6NJB7 356 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 C17orf98A8MV24 154 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 ISLRO14498 428 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PDE6DO43924 150 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 NCR2O95944 276 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 IGKV3-11P04433 115 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 ADH4P08319 380 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 HIST1H1EP10412 219 aaKnown RBP6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 MC5RP33032 325 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 GRB2P62993 217 aaKnown RBP6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 CXorf67Q86X51 503 aaPredicted RBP6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 OR2K2Q8NGT1 345 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 ATP6V0BQ99437 205 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PHF7Q9BWX1 381 aaPredicted RBP6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 ULBP2Q9BZM5 246 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PLSCR4Q9NRQ2 329 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM38BQ9NVV0 291 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 PEF1Q9UBV8 284 aaKnown RBP6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 OR2W1Q9Y3N9 320 aa6.04□□□□□ -1.44
LIMCH1-207ENST00000508466 A0A0G2JLM5 398 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 PLAUP00749 431 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 CCL1P22362 96 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 ARL4DP49703 201 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 ARF6P62330 175 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 AESQ08117 197 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 ETDBQ3ZM63 59 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM211Q6ICI0 200 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 FGF14Q92915 247 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 NINJ1Q92982 152 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 URB1-AS1Q96HZ7 61 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM147Q9BVK8 224 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 FGF23Q9GZV9 251 aaPredicted RBP6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 MBNL3Q9NUK0 354 aaKnown RBP6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 TRAPPC2LQ9UL33 140 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 DMXL1Q9Y485 3027 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 TRAV5A0A0B4J249 113 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 CELA2AP08217 269 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 LINC00869P0C866 280 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 OR1D5P58170 312 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 IBA57Q5T440 356 aaKnown RBP6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 SLC22A18ASQ8N1D0 253 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 DRAM1Q8N682 238 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 MS4A5Q9H3V2 200 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 MOB1AQ9H8S9 216 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 C1RLQ9NZP8 487 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 MED13Q9UHV7 2174 aa6.03□□□□□ -1.44
LIMCH1-207ENST00000508466 LOC389332A0A1B0GUA5 103 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 VWC2LB2RUY7 222 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 DEGS1O15121 323 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 LEPROTL1O95214 131 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 CNIH1O95406 144 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 NGFP01138 241 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 IGHMP01871 453 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 PTGDSP41222 190 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 CX3CL1P78423 397 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 PSG3Q16557 428 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM196Q5HYL7 178 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 TIMM23BQ5SRD1 257 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 TMEM14EPQ6UXP3 125 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 ASCL4Q6XD76 172 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 Q71RC1 249 aaPredicted RBP6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 ARPC1AQ92747 370 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 SPTSSAQ969W0 71 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 C18orf15Q96N68 181 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 GNB1LQ9BYB4 327 aa6.02□□□□□ -1.44
LIMCH1-207ENST00000508466 TRAV3A0A0B4J244 114 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 TMPRSS2O15393 492 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 CD5LO43866 347 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 TNFP01375 233 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM106CPP0CH98 169 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 NMUP48645 174 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 GUSBP1Q15486 140 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM106AQ4KMX7 169 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 TMEM97Q5BJF2 176 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 C3orf56Q8N813 242 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 OR8A1Q8NGG7 326 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 TRIB1Q96RU8 372 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 TPPP3Q9BW30 176 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 C1QTNF5Q9BXJ0 243 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 NPFFR1Q9GZQ6 430 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 KCNIP2Q9NS61 270 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 ALKBH4Q9NXW9 302 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 MRPL27Q9P0M9 148 aaKnown RBP6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 WNK2Q9Y3S1 2297 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1B0GV72 72 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 SYS1-DBNDD2H3BUS1 97 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 TNFSF11O14788 317 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 DHHO43323 396 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 FCGR2BP31994 310 aaPredicted RBP6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 HSD52Q0P140 79 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 DEFB133Q30KQ1 61 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 C19orf35Q6ZS72 473 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 VWCEQ96DN2 955 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 POM121L2Q96KW2 1035 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 DEFB118Q96PH6 123 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 DCTN5Q9BTE1 182 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 RABAC1Q9UI14 185 aa6.02□□□□□ -1.45
LIMCH1-207ENST00000508466 KLF13Q9Y2Y9 288 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms