RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CYHR1Q6ZMK1 362 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 NIT1Q86X76 327 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 YIPF7Q8N8F6 280 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 TMEM75Q8N9X5 138 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR11G2Q8NGC1 345 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR51H1Q8NH63 302 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 CGREF1Q99674 301 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 EBNA1BP2Q99848 306 aaKnown RBP2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 ZNF286AQ9HBT8 521 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 FGFR1OP2Q9NVK5 253 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 POLR3HQ9Y535 204 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 PHLDA3Q9Y5J5 127 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR51B4Q9Y5P0 310 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 CCDC88CQ9P219 2028 aa2.9□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 COPEO14579 308 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 UBR5O95071 2799 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 TYMSP04818 313 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 CTLA4P16410 223 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 ORM2P19652 201 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 GABRA3P34903 492 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 PPP1R2P41236 205 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 PSMD8P48556 350 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 S100A12P80511 92 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 MAPK14Q16539 360 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 SDK2Q58EX2 2172 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 MESTQ5EB52 335 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 OGFRL1Q5TC84 451 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 Q6ZRU5 148 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 LYZL2Q7Z4W2 148 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 DEFB106AQ8N104 65 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR10D3Q8NH80 312 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 RNF133Q8WVZ7 376 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 SLC35B4Q969S0 331 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 TLCD1Q96CP7 247 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 C9orf16Q9BUW7 83 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR51B6Q9H340 312 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 RPUSD1Q9UJJ7 312 aaKnown RBP2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 NBASA2RRP1 2371 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPTBP11277 2137 aa2.89□□□□□ -1.95
HMGB1P3-201ENST00000502802 ZNF106Q9H2Y7 1883 aaKnown RBP2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 DOPEY2Q9Y3R5 2298 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 MAST4O15021 2626 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 TRBV24-1A0A075B6N3 115 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 IGKV1-12A0A0C4DH73 117 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 A0A0D9SEW6 157 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 LRRN3E7EW58 273 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 IGKV1D-12P01611 117 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 IGHMP01871 453 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 ATP5G1P05496 136 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 CRYBA1P05813 215 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 RAB14P61106 215 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 LGALSLQ3ZCW2 172 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 SAPCD1Q5SSQ6 148 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 PIGXQ8TBF5 258 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 KLK6Q92876 244 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 MED18Q9BUE0 208 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 DERL2Q9GZP9 239 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 EIF5A2Q9GZV4 153 aaKnown RBP2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 DUSP21Q9H596 190 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR5V1Q9UGF6 321 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 DNAJC12Q9UKB3 198 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 HS3ST2Q9Y278 367 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 U3KQK5 164 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 PTPN13Q12923 2485 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 SEC16AO15027 2179 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 MED13Q9UHV7 2174 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 RELNP78509 3460 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 HECTD1Q9ULT8 2610 aa2.88□□□□□ -1.95
HMGB1P3-201ENST00000502802 CENPEQ02224 2701 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPTA1P02549 2419 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 TMEM210A6NLX4 147 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 C15orf65H3BRN8 121 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 KPNA3O00505 521 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 EEF1E1O43324 174 aaKnown RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 SH2D1AO60880 128 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 ZNF189O75820 626 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 ATP5HO75947 161 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 PRB1P04280 392 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR13C7P0DN81 318 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR12D1P0DN82 309 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 CXCL3P19876 107 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 FOXA1P55317 472 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 FADDQ13158 208 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 APOFQ13790 326 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 PDK2Q15119 407 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 IGFBP7Q16270 282 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 BRMS1LQ5PSV4 323 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 C10orf91Q5T1B1 145 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 C22orf39Q6P5X5 142 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 LRP11Q86VZ4 500 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR4C6Q8NH72 309 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 CDC26Q8NHZ8 85 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 ACY3Q96HD9 319 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR7D2Q96RA2 312 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 SELENOSQ9BQE4 189 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 CDCA4Q9BXL8 241 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 SLC23A2Q9UGH3 650 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 PAIP2BQ9ULR5 123 aaKnown RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 ZNF443Q9Y2A4 671 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms