RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ATG12O94817 140 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 FGF2P09038 288 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 PSMB6P28072 239 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 IFITM3Q01628 133 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 TMEM128Q5BJH2 165 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 Q6ZRM9 215 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 SLC25A42Q86VD7 318 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 OR1L8Q8NGR8 309 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 RNASE11Q8TAA1 199 aaKnown RBP15.08■□□□□ 0
HDAC4-212ENST00000495497 C4orf3Q8WVX3 66 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 RBPMSQ93062 196 aaKnown RBP15.08■□□□□ 0
HDAC4-212ENST00000495497 SLA2Q9H6Q3 261 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 NDUFA4L2Q9NRX3 87 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 TMEM14BQ9NUH8 114 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 VWFP04275 2813 aa15.08■□□□□ 0
HDAC4-212ENST00000495497 IGLC7A0M8Q6 106 aa15.07■□□□□ 0
HDAC4-212ENST00000495497 I3L521 148 aa15.07■□□□□ 0
HDAC4-212ENST00000495497 UPK1BO75841 260 aa15.07■□□□□ 0
HDAC4-212ENST00000495497 PF4P02776 101 aa15.07■□□□□ 0
HDAC4-212ENST00000495497 PPP1R1AQ13522 171 aa15.07■□□□□ 0
HDAC4-212ENST00000495497 GPR146Q96CH1 333 aa15.07■□□□□ 0
HDAC4-212ENST00000495497 RRNAD1Q96FB5 475 aaKnown RBP15.07■□□□□ 0
HDAC4-212ENST00000495497 NPIPB5A8MRT5 1133 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 ANXA3P12429 323 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 CTRB1P17538 263 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 VAMP1P23763 118 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 WT1-ASQ06250 92 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 ANKRD55Q3KP44 614 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 SPINK9Q5DT21 86 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 CTRB2Q6GPI1 263 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 LYZL2Q7Z4W2 148 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 SLC35G3Q8N808 338 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 FKBP11Q9NYL4 201 aa15.06■□□□□ 0
HDAC4-212ENST00000495497 CCL24O00175 119 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 OR2J3O76001 311 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 SFT2D2O95562 160 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 CRYGCP07315 174 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 OR13C7P0DN81 318 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 ANXA7P20073 488 aaKnown RBP15.05■□□□□ -0
HDAC4-212ENST00000495497 OR11H1Q8NG94 326 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 OR5B3Q8NH48 314 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 ZNF257Q9Y2Q1 563 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 WNK1Q9H4A3 2382 aa15.05■□□□□ -0
HDAC4-212ENST00000495497 TRBV9A0A0B4J1U6 114 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 C13orf42A0A1B0GVH6 325 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 ST8SIA3O43173 380 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 BRI3O95415 125 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 SLC6A1P30531 599 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 MYCNOSP40205 109 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 MECP2P51608 486 aaKnown RBP15.04■□□□□ -0
HDAC4-212ENST00000495497 HSPE1P61604 102 aaKnown RBP15.04■□□□□ -0
HDAC4-212ENST00000495497 RHOGP84095 191 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 MRPL41Q8IXM3 137 aaKnown RBP15.04■□□□□ -0
HDAC4-212ENST00000495497 LGI3Q8N145 548 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 IL22RA2Q969J5 263 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 LSM10Q969L4 123 aaKnown RBP15.04■□□□□ -0
HDAC4-212ENST00000495497 FANCD2OSQ96PS1 177 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 P2RX4Q99571 388 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 C20orf85Q9H1P6 137 aa15.04■□□□□ -0
HDAC4-212ENST00000495497 PKD1L1Q8TDX9 2849 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 TCRBP04435 133 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 LGALS1P09382 135 aaKnown RBP15.03■□□□□ -0
HDAC4-212ENST00000495497 DEFA4P12838 97 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 RAB25P57735 213 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 RUNX1Q01196 453 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 ASAH1Q13510 395 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 ZNF429Q86V71 674 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 FAM219AQ8IW50 185 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 LINC00482Q8N8I6 264 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 OR1N2Q8NGR9 330 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 SRSF8Q9BRL6 282 aaKnown RBP15.03■□□□□ -0
HDAC4-212ENST00000495497 CACNG5Q9UF02 275 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 DMRT1Q9Y5R6 373 aa15.03■□□□□ -0
HDAC4-212ENST00000495497 TRAV6A0A075B6T7 132 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 IGHV4OR15-8A0A075B7B6 117 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 A0A087WW49 117 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 A0A0B4J2A0 478 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 A0A0G2JLM5 398 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 C9orf170A2RU37 121 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 ANKRD34BA5PLL1 514 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 NDUFB8O95169 186 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 IFNA17P01571 189 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 OR4E1P0C645 316 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 PRCDQ00LT1 54 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 THOC7Q6I9Y2 204 aaKnown RBP15.02■□□□□ -0
HDAC4-212ENST00000495497 SHPKQ9UHJ6 478 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 S4R3C0 116 aa15.02■□□□□ -0
HDAC4-212ENST00000495497 FAM240BA0A1B0GVZ2 78 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 NXPH3O95157 252 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 HLA-AP01891 365 aaKnown RBP15.01□□□□□ -0.01
HDAC4-212ENST00000495497 CD33P20138 364 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 UBE2MP61081 183 aaKnown RBP15.01□□□□□ -0.01
HDAC4-212ENST00000495497 SRPXP78539 464 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 ATP5G2Q06055 141 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 MZT2BQ6NZ67 158 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 USMG5Q96IX5 58 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-212ENST00000495497 FBXL7Q9UJT9 491 aa15.01□□□□□ -0.01
HDAC4-212ENST00000495497 IGLV11-55A0A075B6I3 123 aa15□□□□□ -0.01
HDAC4-212ENST00000495497 FAM223BA6NKX1 122 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms