RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
GPC1-209ENST00000495100 GFRALQ6UXV0 394 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 HIST3H2BBQ8N257 126 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 OR10G8Q8NGN5 311 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 NEUROG1Q92886 237 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 OR1P1Q8NH06 330 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 ZNF835Q9Y2P0 537 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 MGST3O14880 152 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 ZNF137PP52743 207 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 OCC1Q8TAD7 63 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 TMEM18Q96B42 140 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 C15orf62A8K5M9 175 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 MT-CO2P00403 227 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 HPRT1P00492 218 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 HRASP01112 189 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 HOXA6P31267 233 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 GNG4P50150 75 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 SPCS3P61009 180 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
GPC1-209ENST00000495100 DIAPH2-AS1Q14236 149 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 SLC35E4Q6ICL7 350 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 LINC00596Q86U02 117 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 OR1B1Q8NGR6 318 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 LYPD6BQ8NI32 183 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 SIRT7Q9NRC8 400 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 RNF7Q9UBF6 113 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 HSPB7Q9UBY9 170 aa11.13□□□□□ -0.63
GPC1-209ENST00000495100 MUC21A0A0G2JKD1 596 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 MUC21A0A140T8X8 626 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 PRRG2O14669 202 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 TDGF1P13385 188 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 MUC21Q5SSG8 566 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 FAM19A2Q8N3H0 131 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 CNIH1O95406 144 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 IGHV2-5P01817 119 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
GPC1-209ENST00000495100 OR4A8P0C604 315 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 PYYP10082 97 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 IL3RAP26951 378 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 TIGITQ495A1 244 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 KRTCAP3Q53RY4 240 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 CT45A1Q5HYN5 189 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 ZNF474Q6S9Z5 364 aaPredicted RBP11.12□□□□□ -0.63
GPC1-209ENST00000495100 CT45A3Q8NHU0 189 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 ABCA2Q9BZC7 2435 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 TMEM14EPQ6UXP3 125 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 TECRQ9NZ01 308 aaKnown RBP11.12□□□□□ -0.63
GPC1-209ENST00000495100 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
GPC1-209ENST00000495100 AMBPP02760 352 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 CSN3P07498 182 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 DDTP30046 118 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 RTL8BQ17RB0 113 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 PRR30Q53SZ7 412 aaPredicted RBP11.11□□□□□ -0.63
GPC1-209ENST00000495100 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 SLC25A10Q9UBX3 287 aaPredicted RBP11.11□□□□□ -0.63
GPC1-209ENST00000495100 PITPNC1Q9UKF7 332 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 TMEM210A6NLX4 147 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 RAB29O14966 203 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 TNXAQ16473 311 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 LURAP1Q96LR2 239 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 HSPB9Q9BQS6 159 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 DSCAMO60469 2012 aa11.11□□□□□ -0.63
GPC1-209ENST00000495100 COX7A2P2O60397 106 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 APOA2P02652 100 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 NPPCP23582 126 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 TIMP3P35625 211 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 CNN1P51911 297 aaKnown RBP11.1□□□□□ -0.63
GPC1-209ENST00000495100 ST6GALNAC3Q8NDV1 305 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 MRPS18CQ9Y3D5 142 aaKnown RBP11.1□□□□□ -0.63
GPC1-209ENST00000495100 HELTA6NFD8 242 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
GPC1-209ENST00000495100 ADH4P08319 380 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 CRISP2P16562 243 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 GPR6P46095 362 aaPredicted RBP11.1□□□□□ -0.63
GPC1-209ENST00000495100 AMTP48728 403 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 ERASQ7Z444 233 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 EAF1Q96JC9 268 aaPredicted RBP11.1□□□□□ -0.63
GPC1-209ENST00000495100 MGST2Q99735 147 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 PIGBOS1A0A0B4J2F0 54 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 TGOLN2O43493 480 aa11.1□□□□□ -0.63
GPC1-209ENST00000495100 PROP1O75360 226 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms