RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 NPBQ8NG41 125 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 OR4A5Q8NH83 315 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 LHFPL5Q8TAF8 219 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 ALX4Q9H161 411 aaPredicted RBP11.32□□□□□ -0.6
USP11-207ENST00000478596 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 KIAA1109Q2LD37 5005 aa11.32□□□□□ -0.6
USP11-207ENST00000478596 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
USP11-207ENST00000478596 CDS2O95674 445 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 IL5P05113 134 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
USP11-207ENST00000478596 OXA1LQ15070 435 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 FAM219AQ8IW50 185 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 CHPT1Q8WUD6 406 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 COMMD5Q9GZQ3 224 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 ZNF430Q9H8G1 570 aaPredicted RBP11.31□□□□□ -0.6
USP11-207ENST00000478596 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SHPKQ9UHJ6 478 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 SMAD5-AS1Q9Y6J3 95 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
USP11-207ENST00000478596 IGKV1-5P01602 117 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 VDAC1P21796 283 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 MECP2P51608 486 aaKnown RBP11.3□□□□□ -0.6
USP11-207ENST00000478596 PRSS8Q16651 343 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 LYZL2Q7Z4W2 148 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 FOXRED2Q8IWF2 684 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
USP11-207ENST00000478596 OR1S1Q8NH92 325 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 TMEM167AQ8TBQ9 72 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 MITD1Q8WV92 249 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 P2RX4Q99571 388 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 PLSCR3Q9NRY6 295 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 ALG5Q9Y673 324 aa11.3□□□□□ -0.6
USP11-207ENST00000478596 ALMS1Q8TCU4 4167 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 SNRPGP15A8MWD9 76 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 UPK2O00526 184 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 CCSO14618 274 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 GOSR2O14653 212 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 NXPH3O95157 252 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 SULT1A3P0DMM9 295 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 SULT1A4P0DMN0 295 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 HLA-GP17693 338 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 MYCNOSP40205 109 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 RPL27AP46776 148 aaKnown RBP11.29□□□□□ -0.6
USP11-207ENST00000478596 PJVKQ0ZLH3 352 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 POU2AF1Q16633 256 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 ECSCRQ19T08 205 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 FYTTD1Q96QD9 318 aaKnown RBP11.29□□□□□ -0.6
USP11-207ENST00000478596 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 OR51J1Q9H342 316 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
USP11-207ENST00000478596 TNCP24821 2201 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 ADAP1O75689 374 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 SCGB1D2O95969 90 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 IFNA17P01571 189 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 MAS1LP35410 378 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
USP11-207ENST00000478596 SMCO1Q147U7 214 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 FXYD3Q14802 87 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 GGNBP1Q5YKI7 109 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
USP11-207ENST00000478596 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
USP11-207ENST00000478596 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 FGF2P09038 288 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 CX3CL1P78423 397 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 C10orf55Q5SWW7 151 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 GSG1LQ6UXU4 331 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 SRSF12Q8WXF0 261 aaKnown RBP11.27□□□□□ -0.61
USP11-207ENST00000478596 GPR146Q96CH1 333 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.61
USP11-207ENST00000478596 MED28Q9H204 178 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 MGAT4CQ9UBM8 478 aa11.27□□□□□ -0.61
USP11-207ENST00000478596 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms