RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 HOXB5P09067 269 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 APELAP0DMC3 54 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CD28P10747 220 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 SLC25A6P12236 298 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CTRB1P17538 263 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 RPL27AP46776 148 aaKnown RBP8.08□□□□□ -1.12
CASC3-204ENST00000474190 AKR1C2P52895 323 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 ERVK-16P61578 105 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 HSPE1P61604 102 aaKnown RBP8.08□□□□□ -1.12
CASC3-204ENST00000474190 SRPXP78539 464 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CD83Q01151 205 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 PLGLAQ15195 96 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CXorf66Q5JRM2 361 aaPredicted RBP8.08□□□□□ -1.12
CASC3-204ENST00000474190 CTRB2Q6GPI1 263 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 C12orf45Q8N5I9 185 aaPredicted RBP8.08□□□□□ -1.12
CASC3-204ENST00000474190 TTC9CQ8N5M4 171 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 OR4D5Q8NGN0 318 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 OR5B3Q8NH48 314 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 FANCD2OSQ96PS1 177 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CITED1Q99966 193 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 AIFM2Q9BRQ8 373 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 C11orf1Q9H5F2 150 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 PRNDQ9UKY0 176 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 TMED3Q9Y3Q3 217 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 OR51B2Q9Y5P1 312 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 ALG5Q9Y673 324 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 TGP01266 2768 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 TRBV9A0A0B4J1U6 114 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 A0A1B0GU03 582 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 PRAF2O60831 178 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 BRI3O95415 125 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 TMEM50AO95807 157 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 ANXA3P12429 323 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 H2BFSP57053 126 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 PRCDQ00LT1 54 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 FOXL1Q12952 345 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 ECSCRQ19T08 205 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 BSXQ3C1V8 233 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 SPINK9Q5DT21 86 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 C18orf65Q6ZTR6 163 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 FAM110DQ8TAY7 271 aaPredicted RBP8.07□□□□□ -1.12
CASC3-204ENST00000474190 ZNF414Q96IQ9 312 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 HSPB7Q9UBY9 170 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 DNAH3Q8TD57 4116 aa8.07□□□□□ -1.12
CASC3-204ENST00000474190 A0A1B0GUS0 222 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 NPIPB5A8MRT5 1133 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 FBXO24O75426 580 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 CNIH1O95406 144 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 PRH1P02810 166 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 REG1AP05451 166 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 PSMB6P28072 239 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 DEFA5Q01523 94 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 ID3Q02535 119 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 SMCO1Q147U7 214 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 UNQ5815/PRO19632Q6UWF5 114 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 Q6ZNX1 250 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 OR2C3Q8N628 320 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 OR5AU1Q8NGC0 362 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 COQ8AQ8NI60 647 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 RRNAD1Q96FB5 475 aaKnown RBP8.06□□□□□ -1.12
CASC3-204ENST00000474190 SRSF8Q9BRL6 282 aaKnown RBP8.06□□□□□ -1.12
CASC3-204ENST00000474190 ZNF747Q9BV97 191 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.06□□□□□ -1.12
CASC3-204ENST00000474190 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
CASC3-204ENST00000474190 PSMB11A5LHX3 300 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 CREBL2O60519 120 aaPredicted RBP8.05□□□□□ -1.12
CASC3-204ENST00000474190 SNAPC5O75971 98 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 ATG12O94817 140 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 NXPH3O95157 252 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 SIX6O95475 246 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 RPLP1P05386 114 aaKnown RBP8.05□□□□□ -1.12
CASC3-204ENST00000474190 TRAPPC2P0DI81 140 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 TRAPPC2BP0DI82 140 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 SULT1A3P0DMM9 295 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 SULT1A4P0DMN0 295 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 CXCL3P19876 107 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 PAX9P55771 341 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 TNFRSF9Q07011 255 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 FOXE3Q13461 319 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 C11orf44Q8N8P7 122 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
CASC3-204ENST00000474190 OR11H7Q8NGC8 314 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 FYTTD1Q96QD9 318 aaKnown RBP8.05□□□□□ -1.12
CASC3-204ENST00000474190 P2RX4Q99571 388 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 PHB2Q99623 299 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 SPIN2AQ99865 258 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 CITED2Q99967 270 aaPredicted RBP8.05□□□□□ -1.12
CASC3-204ENST00000474190 SPIN2BQ9BPZ2 258 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 COMMD5Q9GZQ3 224 aa8.05□□□□□ -1.12
CASC3-204ENST00000474190 IGLV11-55A0A075B6I3 123 aa8.04□□□□□ -1.12
CASC3-204ENST00000474190 A0A1W2PN81 502 aa8.04□□□□□ -1.12
CASC3-204ENST00000474190 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
CASC3-204ENST00000474190 DHFRP00374 187 aa8.04□□□□□ -1.12
CASC3-204ENST00000474190 MBPP02686 304 aaPredicted RBP8.04□□□□□ -1.12
CASC3-204ENST00000474190 OR13C7P0DN81 318 aa8.04□□□□□ -1.12
CASC3-204ENST00000474190 RNASE2P10153 161 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms