RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CGB3P0DN86 165 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 CGB7P0DN87 165 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 NDUFB7P17568 137 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 DMRTC2Q8IXT2 367 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 NUPR1O60356 82 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 GCHFRP30047 84 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 RAB4BP61018 213 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 EFNB3Q15768 340 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 UTF1Q5T230 341 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 C22orf34Q6ZV56 151 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 PPP1R35Q8TAP8 253 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 SSMEM1Q8WWF3 244 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 SH3BGRL2Q9UJC5 107 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 IGLV3-9A0A075B6K5 115 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 A0A1B0GUS0 222 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 C16orf97H3BN30 126 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 CD40P25942 277 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 SELENOVP59797 346 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 SSX8Q7RTT4 187 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 TCF23Q7RTU1 214 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 OR4S2Q8NH73 311 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 C11orf52Q96A22 123 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 WFIKKN1Q96NZ8 548 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
PRPF38B-204ENST00000467302 DCHS1Q96JQ0 3298 aa12.08□□□□□ -0.47
PRPF38B-204ENST00000467302 IGHV3OR15-7A0A075B7D8 119 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 K7EN84 100 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 ADMP35318 185 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 SPATA31B1PQ5VZV4 182 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 OR2V2Q96R30 315 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 FKBP11Q9NYL4 201 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 CALYQ9NYX4 217 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 JKAMPQ9P055 326 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 RAXQ9Y2V3 346 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 SPRY3O43610 288 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 SELENOTP62341 195 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 RHOBP62745 196 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
PRPF38B-204ENST00000467302 PTPRQQ9UMZ3 2332 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 LHBP01229 141 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 COL8A2P25067 703 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 NPY1RP25929 384 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 RAB7AP51149 207 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 HSPE1P61604 102 aaKnown RBP12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 C17orf58Q2M2W7 97 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 HLA-DRB5Q30154 266 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 CT45A1Q5HYN5 189 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 TMEM108Q6UXF1 575 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 SLC24A4Q8NFF2 622 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 CT45A3Q8NHU0 189 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 NCOR1P1Q9H4R4 102 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
PRPF38B-204ENST00000467302 ATMQ13315 3056 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 C9JCJ5 164 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 FOXH1O75593 365 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 HNF1AP20823 631 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 THBS3P49746 956 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 PRR20EP86478 221 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 PRR20CP86479 221 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 PRR20DP86480 221 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 PRR20BP86481 221 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 PRR20AP86496 221 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 MOGAT3Q86VF5 341 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 NUP37Q8NFH4 326 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 TP53TG3Q9ULZ0 132 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 PIEZO2Q9H5I5 2752 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 TRGV10A0A0A0MS01 117 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 CA2P00918 260 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 AREGP15514 252 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 C1orf194Q5T5A4 169 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 POLR3KQ9Y2Y1 108 aaPredicted RBP12.06□□□□□ -0.48
PRPF38B-204ENST00000467302 CADP27708 2225 aa12.05□□□□□ -0.48
PRPF38B-204ENST00000467302 SAA2-SAA4A0A096LPE2 208 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms