RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 SSX9Q7RTT3 188 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 HSD17B13Q7Z5P4 300 aaPredicted RBP9.22□□□□□ -0.93
VPS52-213ENST00000461743 MRPL41Q8IXM3 137 aaKnown RBP9.22□□□□□ -0.93
VPS52-213ENST00000461743 C9orf62Q8N4C0 152 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 ADAD2Q8NCV1 583 aaKnown RBP9.22□□□□□ -0.93
VPS52-213ENST00000461743 OR13C8Q8NGS7 320 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 SCGB3A2Q96PL1 93 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 THAP7Q9BT49 309 aaPredicted RBP9.22□□□□□ -0.93
VPS52-213ENST00000461743 KLK15Q9H2R5 256 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 HRASLSQ9HDD0 168 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 COA4Q9NYJ1 87 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 COPZ2Q9P299 210 aa9.22□□□□□ -0.93
VPS52-213ENST00000461743 C14orf166Q9Y224 244 aaKnown RBP9.22□□□□□ -0.93
VPS52-213ENST00000461743 MSGN1A6NI15 193 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 FAM223BA6NKX1 122 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 TEX22C9J3V5 150 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 UPK2O00526 184 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 PLA2G10O15496 165 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 DHFRP00374 187 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 SERPINE2P07093 398 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 LPAR6P43657 344 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 ZNF616Q08AN1 781 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 KLF9Q13886 244 aaPredicted RBP9.21□□□□□ -0.94
VPS52-213ENST00000461743 ZNF585BQ52M93 769 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 C10orf55Q5SWW7 151 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 FAAP20Q6NZ36 180 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 C18orf65Q6ZTR6 163 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 FAM223AQ8IWN6 122 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 TOMM5Q8N4H5 51 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 TTC9CQ8N5M4 171 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 USMG5Q96IX5 58 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 COMMD5Q9GZQ3 224 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 GNB4Q9HAV0 340 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 FKBP11Q9NYL4 201 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 HSPB11Q9Y547 144 aa9.21□□□□□ -0.94
VPS52-213ENST00000461743 C13orf42A0A1B0GVH6 325 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 KLK9Q2XQG4 91 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 OR11H1Q8NG94 326 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 OR51S1Q8NGJ8 323 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 OR5B3Q8NH48 314 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 MARCH1Q8TCQ1 289 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 SEC22AQ96IW7 307 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 MARVELD1Q9BSK0 173 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
VPS52-213ENST00000461743 ZNF355PQ9NSJ1 428 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 KLK9Q9UKQ9 250 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 PRNDQ9UKY0 176 aa9.2□□□□□ -0.94
VPS52-213ENST00000461743 TRBV9A0A0B4J1U6 114 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 C3orf85A0A1B0GTC6 90 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 C15orf61A6NNL5 157 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 CYB5BO43169 146 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 LYRM1O43325 122 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 SNAPC5O75971 98 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 KRASP01116 189 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 CRYGCP07315 174 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 UCP1P25874 307 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 G6PCP35575 357 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 OR2B8PP59922 312 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 DEFB136Q30KP8 78 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 CLLU1Q5K131 121 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 NECAP1Q8NC96 275 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 OR5T1Q8NG75 326 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 OR1L8Q8NGR8 309 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 C5orf66Q9H5L9 145 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 MCUBQ9NWR8 336 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 GPR132Q9UNW8 380 aa9.19□□□□□ -0.94
VPS52-213ENST00000461743 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
VPS52-213ENST00000461743 LINC00854A0A1B0GVQ3 168 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 FAM240BA0A1B0GVZ2 78 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 CRYM-AS1A6NIL9 109 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 LINC01619G3V211 115 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 WIPF1O43516 503 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 HIST1H1BP16401 226 aaKnown RBP9.18□□□□□ -0.94
VPS52-213ENST00000461743 PI3P19957 117 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 PSMB6P28072 239 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 CTAG1AP78358 180 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 DHODHQ02127 395 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 BEAN1Q3B7T3 259 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 H2BFWTQ7Z2G1 175 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 OR1N2Q8NGR9 330 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 DPF1Q92782 380 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
VPS52-213ENST00000461743 MS4A10Q96PG2 267 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 TP53RKQ96S44 253 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 SLC25A21Q9BQT8 299 aaPredicted RBP9.18□□□□□ -0.94
VPS52-213ENST00000461743 TMEM222Q9H0R3 208 aa9.18□□□□□ -0.94
VPS52-213ENST00000461743 ZMAT5Q9UDW3 170 aaKnown RBP9.18□□□□□ -0.94
VPS52-213ENST00000461743 SORL1Q92673 2214 aa9.17□□□□□ -0.94
VPS52-213ENST00000461743 TRAV3A0A0B4J244 114 aa9.17□□□□□ -0.94
VPS52-213ENST00000461743 A0A1B0GW64 132 aa9.17□□□□□ -0.94
VPS52-213ENST00000461743 IGLC7A0M8Q6 106 aa9.17□□□□□ -0.94
VPS52-213ENST00000461743 NAP1L6A6NFF2 107 aa9.17□□□□□ -0.94
VPS52-213ENST00000461743 INMT-MINDY4F8WBC2 141 aa9.17□□□□□ -0.94
VPS52-213ENST00000461743 G3V4G9 280 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms