RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CA7P43166 264 aa13.66□□□□□ -0.22
LSS-205ENST00000457828 MRPS11P82912 194 aaKnown RBP13.66□□□□□ -0.22
LSS-205ENST00000457828 FXYD3Q14802 87 aa13.66□□□□□ -0.22
LSS-205ENST00000457828 TEPPQ6URK8 271 aa13.66□□□□□ -0.22
LSS-205ENST00000457828 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
LSS-205ENST00000457828 J3QW42 95 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 TOX4O94842 621 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 CD33P20138 364 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 OR5R1Q8NH85 324 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 PROK2Q9HC23 129 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 TRAV1-1A0A0B4J248 108 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 COX7A2P2O60397 106 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 OR4S2Q8NH73 311 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 ETV2O00321 342 aaPredicted RBP13.65□□□□□ -0.22
LSS-205ENST00000457828 LILRA1O75019 489 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 MPV17P39210 176 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 TMEM242Q9NWH2 141 aa13.65□□□□□ -0.22
LSS-205ENST00000457828 M0QZK8 103 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 MGST3O14880 152 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 GGCTO75223 188 aaKnown RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 RAB7AP51149 207 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 LEAP2Q969E1 77 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 DCTN5Q9BTE1 182 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 IL18BPO95998 194 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 UBE2L3P68036 154 aaKnown RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 ZNF124Q15973 351 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 ZNF664Q8N3J9 261 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 MBD3L4A6NDZ8 208 aaPredicted RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 MBD3L3A6NE82 208 aaPredicted RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 MBD3L5A6NJ08 208 aaPredicted RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 RAB29O14966 203 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 PAX9P55771 341 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 ERHP84090 104 aaKnown RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 MBD3L2Q8NHZ7 208 aaPredicted RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 TIMM9Q9Y5J7 89 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
LSS-205ENST00000457828 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 TCF21O43680 179 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 VENTXO95231 258 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 GZMBP10144 247 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 PTTG1IPP53801 180 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 FAM201AQ5SY85 155 aa13.64□□□□□ -0.23
LSS-205ENST00000457828 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 NTF4P34130 210 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 PLA2G5P39877 138 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 ZFYVE26Q68DK2 2539 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 VMA21Q3ZAQ7 101 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 SSC4DQ8WTU2 575 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 USF1P22415 310 aaPredicted RBP13.63□□□□□ -0.23
LSS-205ENST00000457828 SUB1P53999 127 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■□□ 15
LSS-205ENST00000457828 ASCL4Q6XD76 172 aa13.63□□□□□ -0.23
LSS-205ENST00000457828 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 BRS3P32247 399 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 WDR73Q6P4I2 378 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 TCTEX1D1Q8N7M0 179 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 PIMREGQ9BSJ6 248 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 DERL1Q9BUN8 251 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 GNB4Q9HAV0 340 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 HPRT1P00492 218 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 SPCS3P61009 180 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 LCN2P80188 198 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 IGF2-ASQ6U949 168 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 NHLRC2Q8NBF2 726 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 BLNKQ8WV28 456 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 GTF3AQ92664 365 aaKnown RBP13.62□□□□□ -0.23
LSS-205ENST00000457828 CRYBB3P26998 211 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 FOXL2NBQ6ZUU3 175 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 IGLV3-1P01715 115 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 ADH4P08319 380 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 PDLIM4P50479 330 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 TECRQ9NZ01 308 aaKnown RBP13.62□□□□□ -0.23
LSS-205ENST00000457828 ZNF835Q9Y2P0 537 aa13.62□□□□□ -0.23
LSS-205ENST00000457828 AMMECR1Q9Y4X0 333 aaPredicted RBP13.62□□□□□ -0.23
LSS-205ENST00000457828 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 OPRK1P41145 380 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 ARF6P62330 175 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 TMEM256Q8N2U0 113 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 CHEK1O14757 476 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 MMD2Q8IY49 270 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 F2RL2O00254 374 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 SMAD7O15105 426 aaKnown RBP13.61□□□□□ -0.23
LSS-205ENST00000457828 REG1BP48304 166 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 LINC00205P59089 165 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 PRDM13Q9H4Q3 707 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 INSIG2Q9Y5U4 225 aa13.61□□□□□ -0.23
LSS-205ENST00000457828 MPDU1O75352 247 aa13.6□□□□□ -0.23
LSS-205ENST00000457828 ZNF726P1Q15940 193 aa13.6□□□□□ -0.23
LSS-205ENST00000457828 Q56UQ5 140 aa13.6□□□□□ -0.23
LSS-205ENST00000457828 C11orf42Q8N5U0 333 aa13.6□□□□□ -0.23
LSS-205ENST00000457828 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
LSS-205ENST00000457828 RND2P52198 227 aa13.6□□□□□ -0.23
LSS-205ENST00000457828 ZNF474Q6S9Z5 364 aaPredicted RBP13.6□□□□□ -0.23
LSS-205ENST00000457828 TMEM140Q9NV12 185 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms