RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 OPN1MWP04001 364 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 SULT1A3P0DMM9 295 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 SULT1A4P0DMN0 295 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 CHRNA7P36544 502 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 RGS21Q2M5E4 152 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 PDLIM3Q53GG5 364 aaPredicted RBP11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 C10orf55Q5SWW7 151 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 ZNF329Q86UD4 541 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 FYTTD1Q96QD9 318 aaKnown RBP11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 PDCD10Q9BUL8 212 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 ZFP57Q9NU63 452 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 PRR13Q9NZ81 148 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 NSG2Q9Y328 171 aa11.21□□□□□ -0.61
HMGXB4-204ENST00000455359 INS-IGF2F8WCM5 200 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 CRYGCP07315 174 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 PSMB8P28062 276 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 CD83Q01151 205 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 SMCO1Q147U7 214 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 KLK9Q2XQG4 91 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 ASPHD1Q5U4P2 390 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 Q6ZRM9 215 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
HMGXB4-204ENST00000455359 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 A0A1B0GW64 132 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 IGLC7A0M8Q6 106 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 DBX1A6NMT0 343 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 CYB5BO43169 146 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 PSMB6P28072 239 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 SPCS3P61009 180 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 TMEM65Q6PI78 240 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 C12orf45Q8N5I9 185 aaPredicted RBP11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 OR1L6Q8NGR2 347 aa11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 TSSC4Q9Y5U2 329 aaPredicted RBP11.19□□□□□ -0.62
HMGXB4-204ENST00000455359 TCRBV4S1A1TA0A5B7 111 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 CGB1A6NKQ9 187 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 E7EUB6 86 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 ST8SIA3O43173 380 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 SOX15O60248 233 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 IFNA17P01571 189 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 CD28P10747 220 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 CTRB1P17538 263 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 RAB9AP51151 201 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 KRTAP10-3P60369 221 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 IZUMO4Q1ZYL8 232 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 GGNBP1Q5YKI7 109 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 CTRB2Q6GPI1 263 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 SEC22CQ9BRL7 303 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 PLEKHA3Q9HB20 300 aa11.18□□□□□ -0.62
HMGXB4-204ENST00000455359 HMX3A6NHT5 357 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 PLXNB1O43157 2135 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 PITX3O75364 302 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 HOXB5P09067 269 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 PF4V1P10720 104 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 MYOD1P15172 320 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 ERHP84090 104 aaKnown RBP11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 OR5T1Q8NG75 326 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 OR52B4Q8NGK2 314 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 UBE2E2Q96LR5 201 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 HINT2Q9BX68 163 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 HSPB7Q9UBY9 170 aa11.17□□□□□ -0.62
HMGXB4-204ENST00000455359 A0A0G2JLM5 398 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 LY86O95711 162 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 OR13C7P0DN81 318 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 AREGP15514 252 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 RPL23AP62750 156 aaKnown RBP11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 WT1-ASQ06250 92 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 OXA1LQ15070 435 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 OR1S1Q8NH92 325 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 ENY2Q9NPA8 101 aa11.16□□□□□ -0.62
HMGXB4-204ENST00000455359 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 C7orf66A4D0T2 115 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 MED6O75586 246 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 TRGV3P03979 118 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 DEFA4P12838 97 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 SPNP16150 400 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 ATP5IP56385 69 aaPredicted RBP11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 FAM209BQ5JX69 171 aa11.15□□□□□ -0.62
HMGXB4-204ENST00000455359 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms