RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 DPH3P1Q9H4G8 78 aa3.31□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF430Q9H8G1 570 aaPredicted RBP3.31□□□□□ -1.88
SBDSP1-204ENST00000453858 OR2S2Q9NQN1 319 aa3.31□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF257Q9Y2Q1 563 aa3.31□□□□□ -1.88
SBDSP1-204ENST00000453858 IGLV11-55A0A075B6I3 123 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 PLAC8L1A1L4L8 177 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 LYRM9A8MSI8 78 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 E7EUB6 86 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 H3BNG1 76 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 K7EP13 123 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 K7EQG2 157 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 NDUFA4O00483 81 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 SELENOFO60613 162 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 YPEL1O60688 119 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 NXPH4O95158 308 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 PRM2P04554 102 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 ATP5G1P05496 136 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 GNB3P16520 340 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 RCC1P18754 421 aaPredicted RBP3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 GPR183P32249 361 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 ATP5G3P48201 142 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 GSSP48637 474 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 MRPL19P49406 292 aaKnown RBP3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 HCCSP53701 268 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 FCN2Q15485 313 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 PLET1Q6UQ28 207 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 VTCN1Q7Z7D3 282 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 C1orf158Q8N1D5 194 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 THAP8Q8NA92 274 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 OR10A6Q8NH74 314 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 IFT81Q8WYA0 676 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 FCGR1BQ92637 280 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 RFT1Q96AA3 541 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 OR10C1Q96KK4 312 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 YPEL2Q96QA6 119 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 PHB2Q99623 299 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 URM1Q9BTM9 101 aaKnown RBP3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 ENOPH1Q9UHY7 261 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 VAX2Q9UIW0 290 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 V9GYQ6 96 aa3.3□□□□□ -1.88
SBDSP1-204ENST00000453858 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 A0A096LPF7 62 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 IGHV3-49A0A0A0MS15 119 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 H3BMM0 161 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 RAB29O14966 203 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 SMIM18P0DKX4 95 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 KDELR2P33947 212 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 GBX2P52951 348 aaPredicted RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 PAFAH1B2P68402 229 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 PIGYQ3MUY2 71 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF876PQ49A33 203 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 SYT6Q5T7P8 510 aaPredicted RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 GFI1BQ5VTD9 330 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 TCF24Q7RTU0 167 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 DUSP18Q8NEJ0 188 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 OR8D4Q8NGM9 314 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 RBPMSQ93062 196 aaKnown RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 SPSB1Q96BD6 273 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 DGCR14Q96DF8 476 aaKnown RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 SPIN2AQ99865 258 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 SPIN2BQ9BPZ2 258 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 VSIRQ9H7M9 311 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 MED20Q9H944 212 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 ABCD2Q9UBJ2 740 aa3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 STRAPQ9Y3F4 350 aaKnown RBP3.29□□□□□ -1.88
SBDSP1-204ENST00000453858 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 TRAV9-2A0A087WT02 112 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF701M0R085 212 aaPredicted RBP3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ARPC2O15144 300 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF254O75437 659 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 DIRAS3O95661 229 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 APOHP02749 345 aaPredicted RBP3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 MT-ND2P03891 347 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 RLN1P04808 185 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 KRT8P05787 483 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 MGMTP16455 207 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ATF1P18846 271 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 M6PRP20645 277 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 PTBP1P26599 531 aaKnown RBP eCLIP3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 MICAQ29983 383 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 YIF1BQ5BJH7 314 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 SLC35D3Q5M8T2 416 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 C10orf55Q5SWW7 151 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 IBA57Q5T440 356 aaKnown RBP3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 UTS2BQ765I0 119 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 SLC25A42Q86VD7 318 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 PDPNQ86YL7 162 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF679Q8IYX0 411 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 LRTM2Q8N967 370 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ZNF709Q8N972 641 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 HSD17B11Q8NBQ5 300 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 OR5D18Q8NGL1 313 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 DCANP1Q8TF63 244 aa3.28□□□□□ -1.88
SBDSP1-204ENST00000453858 ADAT3Q96EY9 351 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms