RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 FGFBP3Q8TAT2 258 aa15.46■□□□□ 0.06
PTPA-223ENST00000452489 ZNF48Q96MX3 618 aaPredicted RBP15.46■□□□□ 0.06
PTPA-223ENST00000452489 MS4A5Q9H3V2 200 aa15.46■□□□□ 0.06
PTPA-223ENST00000452489 TSSC4Q9Y5U2 329 aaPredicted RBP15.46■□□□□ 0.06
PTPA-223ENST00000452489 A0A0G2JMM0 328 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 A0A1W2PPB8 328 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 KIR3DP1A8MWS1 328 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 LRP4O75096 1905 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 LEPROTL1O95214 131 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 CA6P23280 308 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 NTF4P34130 210 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 KIR2DL1P43626 348 aaPredicted RBP15.45■□□□□ 0.06
PTPA-223ENST00000452489 FABP6P51161 128 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 RAB31Q13636 194 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 EFNB3Q15768 340 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 ZNF788Q6ZQV5 615 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 KMT2EQ8IZD2 1858 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 ZNF808Q8N4W9 903 aaPredicted RBP15.45■□□□□ 0.06
PTPA-223ENST00000452489 METTL7AQ9H8H3 244 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 SPCS1Q9Y6A9 102 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 A6NJY4 79 aa15.45■□□□□ 0.06
PTPA-223ENST00000452489 MED12LQ86YW9 2145 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 TMEM265A0A087WTH1 108 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 FOXA3P55318 350 aaPredicted RBP15.44■□□□□ 0.06
PTPA-223ENST00000452489 RAB30Q15771 203 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 FAM53AQ6NSI3 398 aaPredicted RBP15.44■□□□□ 0.06
PTPA-223ENST00000452489 CCDC144NLQ6NUI1 221 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 WIPF2Q8TF74 440 aaPredicted RBP15.44■□□□□ 0.06
PTPA-223ENST00000452489 CFAP54Q96N23 3096 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 C21orf140B9A014 251 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 P04436 131 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 KIR3DS1Q14943 382 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 SPEM1Q8N4L4 309 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 C5orf30Q96GV9 206 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 ZNF355PQ9NSJ1 428 aa15.44■□□□□ 0.06
PTPA-223ENST00000452489 TRBV6-6A0A0A6YYG2 114 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 C17orf98A8MV24 154 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 NEURL1O76050 574 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 COX8AP10176 69 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 BRWD1-AS2P59051 145 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 MKXQ8IYA7 352 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 A0A1W2PQF6 199 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 NPIPB11E5RHQ5 1161 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 LINC00205P59089 165 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 NUP35Q8NFH5 326 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 DLL3Q9NYJ7 618 aa15.43■□□□□ 0.06
PTPA-223ENST00000452489 PSMB11A5LHX3 300 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 GAGE12HA6NDE8 117 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 FAM69BQ5VUD6 431 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 VSTM2AQ8TAG5 236 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 MS4A6AQ9H2W1 248 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 USF3Q68DE3 2245 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 LOC102723996A0A087X1L8 192 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 ACTL6BO94805 426 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 AREGP15514 252 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 H2BFWTQ7Z2G1 175 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 TPRX1Q8N7U7 411 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 OR2Z1Q8NG97 314 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 PLA2G2FQ9BZM2 168 aa15.42■□□□□ 0.06
PTPA-223ENST00000452489 MPDU1O75352 247 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 FASLGP48023 281 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 PSG5Q15238 335 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 MIR17HGQ75NE6 70 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 C1orf159Q96HA4 380 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 GCM1Q9NP62 436 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 TIMM8BQ9Y5J9 83 aaPredicted RBP15.41■□□□□ 0.06
PTPA-223ENST00000452489 ABCA7Q8IZY2 2146 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 A0A1W2PPM0 123 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 A6NDN8 102 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 KRTAP27-1Q3LI81 207 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 WIPI1Q5MNZ9 446 aaPredicted RBP15.41■□□□□ 0.06
PTPA-223ENST00000452489 OR5A1Q8NGJ0 315 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 FAM222BQ8WU58 562 aa15.41■□□□□ 0.06
PTPA-223ENST00000452489 PTPRSQ13332 1948 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 A0A1W2PRE2 83 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 FBLL1A6NHQ2 334 aaKnown RBP15.4■□□□□ 0.06
PTPA-223ENST00000452489 OR2J3O76001 311 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 Q6ZR03 302 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 FAM214BQ7L5A3 538 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 IGF2BP2-AS1Q96M15 143 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 YPEL5P62699 121 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 RABAC1Q9UI14 185 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 TRAPPC2LQ9UL33 140 aa15.4■□□□□ 0.06
PTPA-223ENST00000452489 GGTLC3B5MD39 225 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 SP9P0CG40 484 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 CD300EQ496F6 205 aaPredicted RBP15.39■□□□□ 0.05
PTPA-223ENST00000452489 LYSMD4Q5XG99 296 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 RASL11AQ6T310 242 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 LRRC29Q8WV35 223 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 H1FXQ92522 213 aaKnown RBP15.39■□□□□ 0.05
PTPA-223ENST00000452489 TRIB1Q96RU8 372 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 OR2H1Q9GZK4 316 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 LAMA1P25391 3075 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 CABIN1Q9Y6J0 2220 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 SERTM2A0A1B0GWG4 89 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 C7orf61Q8IZ16 206 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 OR1L3Q8NH93 324 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 LINC00479Q96M42 142 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 MAP1LC3CQ9BXW4 147 aa15.39■□□□□ 0.05
PTPA-223ENST00000452489 VWC2LB2RUY7 222 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms