RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	SULT1A4	P0DMN0	295 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	PF4V1	P10720	104 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	PPIF	P30405	207 aa	Known RBP	10.31	□□□□□ -0.76
SF1-206	ENST00000413725	NMS	Q5H8A3	153 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	KHDC1L	Q5JSQ8	128 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	TMEM65	Q6PI78	240 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.31	□□□□□ -0.76
SF1-206	ENST00000413725	C11orf44	Q8N8P7	122 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	OR52B4	Q8NGK2	314 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.31	□□□□□ -0.76
SF1-206	ENST00000413725	ZNF431	Q8TF32	576 aa	Predicted RBP	10.31	□□□□□ -0.76
SF1-206	ENST00000413725	MITD1	Q8WV92	249 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	GPR146	Q96CH1	333 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	CITED1	Q99966	193 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	MARVELD1	Q9BSK0	173 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725	CACNG5	Q9UF02	275 aa		10.31	□□□□□ -0.76
SF1-206	ENST00000413725		A0A0B4J293	547 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	TCRBV4S1A1T	A0A5B7	111 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	DBX1	A6NMT0	343 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	TEX22	C9J3V5	150 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725		E7EUB6	86 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725		H3BUA1	57 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	ST8SIA3	O43173	380 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	IFNA21	P01568	189 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	IFNA17	P01571	189 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	IGLV1-40	P01703	118 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	HOXB5	P09067	269 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	CD28	P10747	220 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	KRTAP10-3	P60369	221 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	HSPE1	P61604	102 aa	Known RBP	10.3	□□□□□ -0.76
SF1-206	ENST00000413725	SRSF4	Q08170	494 aa	Known RBP	10.3	□□□□□ -0.76
SF1-206	ENST00000413725	SMCO1	Q147U7	214 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	RGS21	Q2M5E4	152 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	ASPHD1	Q5U4P2	390 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	OR5T1	Q8NG75	326 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	SEC22C	Q9BRL7	303 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	NDUFA4L2	Q9NRX3	87 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	ZNF355P	Q9NSJ1	428 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725	COA4	Q9NYJ1	87 aa		10.3	□□□□□ -0.76
SF1-206	ENST00000413725		A0A1B0GU03	582 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725		A0A1B0GW64	132 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	IGLC7	A0M8Q6	106 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	CGB1	A6NKQ9	187 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	NPIPB5	A8MRT5	1133 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	SLC25A6	P12236	298 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	PSMB8	P28062	276 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	PRCD	Q00LT1	54 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	CD83	Q01151	205 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	GGNBP1	Q5YKI7	109 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725		Q6ZRM9	215 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	TTC9C	Q8N5M4	171 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	RNF152	Q8N8N0	203 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	OR1S1	Q8NH92	325 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	CITED2	Q99967	270 aa	Predicted RBP	10.29	□□□□□ -0.76
SF1-206	ENST00000413725	SLA2	Q9H6Q3	261 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	PLEKHA3	Q9HB20	300 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	ENY2	Q9NPA8	101 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	ZFP57	Q9NU63	452 aa		10.29	□□□□□ -0.76
SF1-206	ENST00000413725	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.29	□□□□□ -0.76
SF1-206	ENST00000413725	SNRPGP15	A8MWD9	76 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	CYB5B	O43169	146 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	SOX15	O60248	233 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	AREG	P15514	252 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	SPN	P16150	400 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	PSMB6	P28072	239 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	SPCS3	P61009	180 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	AARD	Q4LEZ3	155 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	TCTEX1D4	Q5JR98	221 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	NDUFA11	Q86Y39	141 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.28	□□□□□ -0.76
SF1-206	ENST00000413725	UXS1	Q8NBZ7	420 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	OR10W1	Q8NGF6	305 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	OR52E5	Q8NH55	327 aa		10.28	□□□□□ -0.76
SF1-206	ENST00000413725	ADAP1	O75689	374 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	BRI3	O95415	125 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	TRGV3	P03979	118 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	RPLP1	P05386	114 aa	Known RBP	10.27	□□□□□ -0.77
SF1-206	ENST00000413725	REG1A	P05451	166 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	CRYGC	P07315	174 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	OR13C7	P0DN81	318 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	DEFA4	P12838	97 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	CTRB1	P17538	263 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	HOXA1	P49639	335 aa	Predicted RBP	10.27	□□□□□ -0.77
SF1-206	ENST00000413725	RAB9A	P51151	201 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	TPPP2	P59282	170 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	RPL23A	P62750	156 aa	Known RBP	10.27	□□□□□ -0.77
SF1-206	ENST00000413725	ERH	P84090	104 aa	Known RBP	10.27	□□□□□ -0.77
SF1-206	ENST00000413725	CTRB2	Q6GPI1	263 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725	MS4A10	Q96PG2	267 aa		10.27	□□□□□ -0.77
SF1-206	ENST00000413725		A0A1W2PRX2	142 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	CEBPZOS	A8MTT3	80 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	HIST1H1B	P16401	226 aa	Known RBP	10.26	□□□□□ -0.77
SF1-206	ENST00000413725	WT1-AS	Q06250	92 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	TNFRSF9	Q07011	255 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	NSUN5P1	Q3KNT7	163 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.26	□□□□□ -0.77
SF1-206	ENST00000413725	SPINK9	Q5DT21	86 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	LCNL1	Q6ZST4	164 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725	KLK15	Q9H2R5	256 aa		10.26	□□□□□ -0.77
SF1-206	ENST00000413725		A0A0G2JLM5	398 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms