RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 MC5RP33032 325 aa12.72□□□□□ -0.37
CHL1-202ENST00000397491 ID3Q02535 119 aa12.72□□□□□ -0.37
CHL1-202ENST00000397491 FBLN5Q9UBX5 448 aa12.72□□□□□ -0.37
CHL1-202ENST00000397491 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.37
CHL1-202ENST00000397491 GFRALQ6UXV0 394 aa12.71□□□□□ -0.37
CHL1-202ENST00000397491 ASCL5Q7RTU5 278 aa12.71□□□□□ -0.37
CHL1-202ENST00000397491 HES7Q9BYE0 225 aa12.71□□□□□ -0.37
CHL1-202ENST00000397491 PHLDA3Q9Y5J5 127 aa12.71□□□□□ -0.37
CHL1-202ENST00000397491 ACTL10Q5JWF8 245 aa12.71□□□□□ -0.37
CHL1-202ENST00000397491 ZNF501Q96CX3 271 aaPredicted RBP12.71□□□□□ -0.37
CHL1-202ENST00000397491 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.37
CHL1-202ENST00000397491 C10orf128Q5T292 105 aa12.71□□□□□ -0.38
CHL1-202ENST00000397491 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.38
CHL1-202ENST00000397491 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.38
CHL1-202ENST00000397491 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.38
CHL1-202ENST00000397491 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.38
CHL1-202ENST00000397491 MRPL52Q86TS9 123 aaKnown RBP12.71□□□□□ -0.38
CHL1-202ENST00000397491 ACACAQ13085 2346 aa12.71□□□□□ -0.38
CHL1-202ENST00000397491 IGKV1D-8A0A087WSZ0 117 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 RPL39P5Q59GN2 51 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 SNHG12Q9BXW3 62 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 PSG9Q00887 426 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 OSTCQ9NRP0 149 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 ATP5LO75964 103 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 PSG1P11464 419 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 GATA2P23769 480 aaPredicted RBP12.7□□□□□ -0.38
CHL1-202ENST00000397491 TSPOP30536 169 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 PSMG4Q5JS54 123 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 PEAR1Q5VY43 1037 aaPredicted RBP12.7□□□□□ -0.38
CHL1-202ENST00000397491 C1orf174Q8IYL3 243 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 GTSF1LQ9H1H1 148 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
CHL1-202ENST00000397491 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 A0A0A6YYD4 124 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 PTGDSP41222 190 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 CKS1BP61024 79 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
CHL1-202ENST00000397491 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 COL4A5P29400 1685 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 IGLV3-21P80748 117 aaPredicted RBP12.69□□□□□ -0.38
CHL1-202ENST00000397491 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 ZNF441Q8N8Z8 693 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 OR4C13Q8NGP0 309 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 AICDAQ9GZX7 198 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 CCL8P80075 99 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 C16orf92Q96LL3 132 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 ZNF638Q14966 1978 aaKnown RBP12.69□□□□□ -0.38
CHL1-202ENST00000397491 C12orf77C9JDV5 145 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 FOXL1Q12952 345 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 OR5P3Q8WZ94 311 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 RAB1CQ92928 201 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 GPR82Q96P67 336 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 MKRN2OSH3BPM6 223 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 DIRC2Q96SL1 478 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 IDI2-AS1Q9NZ38 188 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 LAMB2P55268 1798 aa12.69□□□□□ -0.38
CHL1-202ENST00000397491 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 TIMP3P35625 211 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 TMEM54Q969K7 222 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 SRXN1Q9BYN0 137 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 DEPPQ9NTK1 212 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 C9JQL5 133 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 OR10J6PQ8NGY7 276 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 TTTY12Q9BZ98 90 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 IFI27L2Q9H2X8 130 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 FSCN3Q9NQT6 498 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 PPIAL4AQ9Y536 164 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 NDUFA3O95167 84 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 NPSP0C0P6 89 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 SLC22A18ASQ8N1D0 253 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 THSD7AQ9UPZ6 1657 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 F2RL2O00254 374 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 ATP5IP56385 69 aaPredicted RBP12.68□□□□□ -0.38
CHL1-202ENST00000397491 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
CHL1-202ENST00000397491 TRAV1-1A0A0B4J248 108 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 IGKV1-9A0A0C4DH69 117 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 GAGE12BA1L429 117 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 LYPD3O95274 346 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 HSD52Q0P140 79 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 ATRXP46100 2492 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 SCN2AQ99250 2005 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 CIRBPQ14011 172 aaKnown RBP12.67□□□□□ -0.38
CHL1-202ENST00000397491 FAM89BQ8N5H3 189 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 COL24A1Q17RW2 1714 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 A0A0G2JLM5 398 aa12.67□□□□□ -0.38
CHL1-202ENST00000397491 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
CHL1-202ENST00000397491 FOXC1Q12948 553 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms