RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SLA2Q9H6Q3 261 aa14.96□□□□□ -0.01
HOXA9-202ENST00000396345 VWFP04275 2813 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 A0A0B4J293 547 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 PIGBOS1A0A0B4J2F0 54 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 A0A0G2JRQ6 117 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 DBX1A6NMT0 343 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 NPIPB5A8MRT5 1133 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 TSPAN15O95858 294 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 TRGV3P03979 118 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 AREGP15514 252 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 ANXA7P20073 488 aaKnown RBP14.95□□□□□ -0.02
HOXA9-202ENST00000396345 TPPP2P59282 170 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 SLC35G3Q8N808 338 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 KLHL30-AS1Q8NEE0 82 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 OR4F17Q8NGA8 305 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 LSM10Q969L4 123 aaKnown RBP14.95□□□□□ -0.02
HOXA9-202ENST00000396345 OR4F4Q96R69 305 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 SRSF8Q9BRL6 282 aaKnown RBP14.95□□□□□ -0.02
HOXA9-202ENST00000396345 NDUFA4L2Q9NRX3 87 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 ZNF257Q9Y2Q1 563 aa14.95□□□□□ -0.02
HOXA9-202ENST00000396345 TRRAPQ9Y4A5 3859 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 TRAV6A0A075B6T7 132 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 A0A0B4J2A0 478 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 C9orf170A2RU37 121 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 BRI3O95415 125 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 OR4E1P0C645 316 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 PSMB6P28072 239 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 RAB25P57735 213 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 DEFA1P59665 94 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 DEFA3P59666 94 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 ANKRD55Q3KP44 614 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 LYZL2Q7Z4W2 148 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 ZNF429Q86V71 674 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 OR10W1Q8NGF6 305 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 GPR146Q96CH1 333 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 UBE2E2Q96LR5 201 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 SHPKQ9UHJ6 478 aa14.94□□□□□ -0.02
HOXA9-202ENST00000396345 IGLC7A0M8Q6 106 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 HLA-AP01891 365 aaKnown RBP14.93□□□□□ -0.02
HOXA9-202ENST00000396345 REG1AP05451 166 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 HSPE1P61604 102 aaKnown RBP14.93□□□□□ -0.02
HOXA9-202ENST00000396345 C4orf46Q504U0 113 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 PRR31Q5SQ13 230 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 Q6ZRM9 215 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 C8orf86Q6ZUL3 223 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 HSD17B13Q7Z5P4 300 aaPredicted RBP14.93□□□□□ -0.02
HOXA9-202ENST00000396345 ENKURQ8TC29 256 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 NUDT15Q9NV35 164 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 WNK1Q9H4A3 2382 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 PKD1L1Q8TDX9 2849 aa14.93□□□□□ -0.02
HOXA9-202ENST00000396345 ST8SIA3O43173 380 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 PRH1P02810 166 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 CRYGCP07315 174 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 H2AFB2P0C5Z0 115 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 OR13C7P0DN81 318 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 CTRB1P17538 263 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 MECP2P51608 486 aaKnown RBP14.92□□□□□ -0.02
HOXA9-202ENST00000396345 DHRS2Q13268 280 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 CTRB2Q6GPI1 263 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 C19orf35Q6ZS72 473 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 LYG2Q86SG7 212 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 LRTM2Q8N967 370 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 C4orf3Q8WVX3 66 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 PDCD10Q9BUL8 212 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 ALX4Q9H161 411 aaPredicted RBP14.92□□□□□ -0.02
HOXA9-202ENST00000396345 GNB4Q9HAV0 340 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.92□□□□□ -0.02
HOXA9-202ENST00000396345 CACNG5Q9UF02 275 aa14.92□□□□□ -0.02
HOXA9-202ENST00000396345 C13orf42A0A1B0GVH6 325 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 DUXBA0A1W2PPF3 345 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 DHFRP00374 187 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 IFNA17P01571 189 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 DEFA4P12838 97 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 PRCDQ00LT1 54 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 WT1-ASQ06250 92 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 OR5B12Q96R08 314 aa14.91□□□□□ -0.02
HOXA9-202ENST00000396345 A0A0G2JLM5 398 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 SULT1A3P0DMM9 295 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 SULT1A4P0DMN0 295 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 RHOGP84095 191 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 NMSQ5H8A3 153 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 MRPL41Q8IXM3 137 aaKnown RBP14.9□□□□□ -0.02
HOXA9-202ENST00000396345 COQ8AQ8NI60 647 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 USMG5Q96IX5 58 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 PLEKHA3Q9HB20 300 aa14.9□□□□□ -0.02
HOXA9-202ENST00000396345 TRBV9A0A0B4J1U6 114 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 OR2J3O76001 311 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 DUS4LO95620 317 aaKnown RBP14.89□□□□□ -0.03
HOXA9-202ENST00000396345 IGHV3-11P01762 117 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 PF4P02776 101 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 DEFA5Q01523 94 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 DEFB136Q30KP8 78 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 SPINK9Q5DT21 86 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 TREML4Q6UXN2 200 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 NRARPQ7Z6K4 114 aa14.89□□□□□ -0.03
HOXA9-202ENST00000396345 FAM223BA6NKX1 122 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 I3L521 148 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 HOXB5P09067 269 aa14.88□□□□□ -0.03
HOXA9-202ENST00000396345 LGALS1P09382 135 aaKnown RBP14.88□□□□□ -0.03
HOXA9-202ENST00000396345 HIST1H1BP16401 226 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms