RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRRK1-201ENST00000388948 CA2P00918 260 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 YLPM1P49750 1951 aaKnown RBP12.54□□□□□ -0.4
LRRK1-201ENST00000388948 ABLIM2Q6H8Q1 611 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 IRF3Q14653 427 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 TUBD1Q9UJT1 453 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 ASIPP42127 132 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 CYP2G1PQ6ZSU1 146 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 CDC42EP3Q9UKI2 254 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 SAPCD1Q5SSQ6 148 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 CRYBB3P26998 211 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
LRRK1-201ENST00000388948 CACNG7P62955 275 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 FOXF2Q12947 444 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 ZNF837Q96EG3 531 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-201ENST00000388948 WNT10AQ9GZT5 417 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 ARFGEF3Q5TH69 2177 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 PAPPA-AS1Q5QFB9 102 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-201ENST00000388948 SP5Q6BEB4 398 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-201ENST00000388948 GLMPQ8WWB7 406 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 C19orf24Q9BVV8 132 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
LRRK1-201ENST00000388948 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 B4DSR2 109 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 TDGF1P13385 188 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 PKDREJQ9NTG1 2253 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 STAG3L2P0CL84 134 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 MALP21145 153 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 MRPS16Q9Y3D3 137 aaKnown RBP12.53□□□□□ -0.4
LRRK1-201ENST00000388948 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
LRRK1-201ENST00000388948 OR11H7Q8NGC8 314 aa12.52□□□□□ -0.4
LRRK1-201ENST00000388948 TRBV20OR9-2A0A075B6H5 130 aa12.52□□□□□ -0.4
LRRK1-201ENST00000388948 TGFBR3LH3BV60 316 aa12.52□□□□□ -0.4
LRRK1-201ENST00000388948 C1QTNF5Q9BXJ0 243 aa12.52□□□□□ -0.4
LRRK1-201ENST00000388948 IGLV3-12A0A075B6K2 115 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF672Q499Z4 452 aaPredicted RBP12.52□□□□□ -0.41
LRRK1-201ENST00000388948 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.52□□□□□ -0.41
LRRK1-201ENST00000388948 PRO1933Q9H354 126 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 TOMM7Q9P0U1 55 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 NEUROG3Q9Y4Z2 214 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 ARID2Q68CP9 1835 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRRK1-201ENST00000388948 LOC102723996A0A087X1L8 192 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 FAM90A1Q86YD7 464 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 TMEM238LA0A1B0GVL6 79 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 A6NJY4 79 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 J3QKU1 62 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 RAB24Q969Q5 203 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 CACNA1HO95180 2353 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 SCGB1A1P11684 91 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 TIMP3P35625 211 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 P2RY4P51582 365 aa12.52□□□□□ -0.41
LRRK1-201ENST00000388948 RPL24P83731 157 aaKnown RBP12.52□□□□□ -0.41
LRRK1-201ENST00000388948 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 C2orf88Q9BSF0 95 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 LINC00527Q9UJ94 153 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 A6NDN8 102 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
LRRK1-201ENST00000388948 ALKBH7Q9BT30 221 aaPredicted RBP12.51□□□□□ -0.41
LRRK1-201ENST00000388948 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRRK1-201ENST00000388948 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
LRRK1-201ENST00000388948 KIAA2026Q5HYC2 2103 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 SDF2L1Q9HCN8 221 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 SRSF7Q16629 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRRK1-201ENST00000388948 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 ST6GALNAC3Q8NDV1 305 aa12.51□□□□□ -0.41
LRRK1-201ENST00000388948 NPIPB9F8W1W9 429 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 NPIPB7O75200 414 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF383Q8NA42 475 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
LRRK1-201ENST00000388948 TRBV5-7A0A0A0MS05 114 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 TRAV24A0A0B4J272 114 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 C7orf77A4D0Y5 90 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 PINLYPA6NC86 204 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 LILRA1O75019 489 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 CRPP02741 224 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 RPS11P62280 158 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRRK1-201ENST00000388948 TEX45Q8NA69 505 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 ELF5Q9UKW6 265 aaPredicted RBP12.5□□□□□ -0.41
LRRK1-201ENST00000388948 FREM3P0C091 2139 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 TRGV4A0A0C4DH28 118 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 VN1R17PQ8TDU5 208 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 TMEM218A2RU14 115 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 RHOGP84095 191 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 ZNF415Q09FC8 603 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 GCSAMLQ5JQS6 135 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 TMEM219Q86XT9 240 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 GATAD1Q8WUU5 269 aa12.5□□□□□ -0.41
LRRK1-201ENST00000388948 IL18BPO95998 194 aa12.49□□□□□ -0.41
LRRK1-201ENST00000388948 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms