RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
USP11-204ENST00000377107 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.7
USP11-204ENST00000377107 PDE6DO43924 150 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 REG1AP05451 166 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 CRYBB3P26998 211 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 SUMO1P63165 101 aaKnown RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 KIAA1644Q3SXP7 199 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 ARSJQ5FYB0 599 aaPredicted RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 A0A1B0GV90 55 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 YPEL1O60688 119 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 CXorf1O96002 111 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 P0C879 139 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 RHOBP62745 196 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 SFRP2Q96HF1 295 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 YPEL2Q96QA6 119 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 COMMD5Q9GZQ3 224 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 ZNF729A6NN14 1252 aaPredicted RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 GLRXP35754 106 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 IER3P46695 156 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 CNN1P51911 297 aaKnown RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 LOXL3P58215 753 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 MBNL2Q5VZF2 373 aaKnown RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 BAGE3Q86Y29 109 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 BAGE2Q86Y30 109 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 C1orf162Q8NEQ5 155 aaPredicted RBP10.64□□□□□ -0.71
USP11-204ENST00000377107 OR10X1Q8NGY0 326 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 TMEM18Q96B42 140 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
USP11-204ENST00000377107 KBTBD11-OT1A0A1B0GTJ5 212 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 GCHFRP30047 84 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 EFNB3Q15768 340 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 C10orf55Q5SWW7 151 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 STUMQ69YW2 141 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 PRR27Q6MZM9 219 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 PRDM13Q9H4Q3 707 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 TGOLN2O43493 480 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 DDTP30046 118 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 RAB7AP51149 207 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 RTL8BQ17RB0 113 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 HARBI1Q96MB7 349 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 TRBV20OR9-2A0A075B6H5 130 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 ZNF891A8MT65 544 aaPredicted RBP10.63□□□□□ -0.71
USP11-204ENST00000377107 IGHV1-46P01743 117 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 OR5G3P0C626 314 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 EIF4EBP1Q13541 118 aaPredicted RBP10.63□□□□□ -0.71
USP11-204ENST00000377107 TCTEX1D1Q8N7M0 179 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 SAMD10Q9BYL1 202 aa10.63□□□□□ -0.71
USP11-204ENST00000377107 SPENQ96T58 3664 aaKnown RBP10.62□□□□□ -0.71
USP11-204ENST00000377107 TOX4O94842 621 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 MT-CO2P00403 227 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 IGLV1-44P01699 117 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 RNF224P0DH78 156 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 TIMP3P35625 211 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 GPX4P36969 197 aaPredicted RBP10.62□□□□□ -0.71
USP11-204ENST00000377107 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 TMEM170AQ8WVE7 144 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 A8MXE2 369 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 FCN1O00602 326 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 C17orf58Q2M2W7 97 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 MRPL54Q6P161 138 aaKnown RBP10.62□□□□□ -0.71
USP11-204ENST00000377107 PQLC2Q6ZP29 291 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 DYNLRB1Q9NP97 96 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 FAM215AQ9Y5M1 114 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 FRMD6-AS1P0C7T7 363 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 OPRK1P41145 380 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 VDAC2P45880 294 aaPredicted RBP10.62□□□□□ -0.71
USP11-204ENST00000377107 BATFQ16520 125 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 OR8I2Q8N0Y5 310 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 OR2T6Q8NHC8 308 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 NABP2Q9BQ15 211 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 KCNIP2Q9NS61 270 aa10.62□□□□□ -0.71
USP11-204ENST00000377107 ZMAT5Q9UDW3 170 aaKnown RBP10.62□□□□□ -0.71
USP11-204ENST00000377107 TACC2O95359 2948 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 TRAV5A0A0B4J249 113 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 SRRM4A7MD48 611 aaKnown RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 H3BTX0 84 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 C1orf185Q5T7R7 199 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 IDI2-AS1Q9NZ38 188 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 SLC25A10Q9UBX3 287 aaPredicted RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 OR4A8P0C604 315 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 GZMBP10144 247 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 GNG4P50150 75 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 MRPL20Q9BYC9 149 aaKnown RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 CD40P25942 277 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 PKIAP61925 76 aa10.61□□□□□ -0.71
USP11-204ENST00000377107 CENPVQ7Z7K6 275 aaPredicted RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 PARD6GQ9BYG4 376 aaPredicted RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 RALYQ9UKM9 306 aaKnown RBP10.61□□□□□ -0.71
USP11-204ENST00000377107 HELTA6NFD8 242 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
USP11-204ENST00000377107 WNT2P09544 360 aa10.6□□□□□ -0.71
USP11-204ENST00000377107 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms