RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 DEFB108AA8MXU0 73 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR2H2O95918 312 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 IGHV3-43DP0DP04 118 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 CDC34P49427 236 aaPredicted RBP14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 GNG3P63215 75 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 SMIM21Q3B7S5 101 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 PRAMEF6Q5VXH4 476 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR10G8Q8NGN5 311 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 KCNS1Q96KK3 526 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 OBP2BQ9NPH6 170 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 TIMM9Q9Y5J7 89 aa14.39□□□□□ -0.11
LDLRAP1-201ENST00000374338 TRBV20OR9-2A0A075B6H5 130 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 SAA2-SAA4A0A096LPE2 208 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 H0Y980 276 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR52L2PQ8NGH6 319 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 SLC17A3O00476 420 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 TOX4O94842 621 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 TIMP3P35625 211 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 PLA2G2CQ5R387 149 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 STUMQ69YW2 141 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 DCTN5Q9BTE1 182 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 ZNF324O75467 553 aaPredicted RBP14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 S1PR2O95136 353 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 CA2P00918 260 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 CTXN2P0C2S0 81 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 AESQ08117 197 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 MPV17L2Q567V2 206 aa14.38□□□□□ -0.11
LDLRAP1-201ENST00000374338 LRBAP50851 2863 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 PSPNO60542 156 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 ARF6P62330 175 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 PSG7Q13046 419 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 S100A7AQ86SG5 101 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 FAM19A2Q8N3H0 131 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 ST6GALNAC3Q8NDV1 305 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR1L1Q8NH94 360 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 FER1L6-AS2Q96M78 137 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 CLEC7AQ9BXN2 247 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 ARFGEF3Q5TH69 2177 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 TRAV38-1A0A0B4J264 116 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 J3QW42 95 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 PDE6DO43924 150 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 RELBQ01201 579 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 SARAFQ96BY9 339 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 IL36BQ9NZH7 164 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 METRNQ9UJH8 293 aa14.37□□□□□ -0.11
LDLRAP1-201ENST00000374338 KMT2EQ8IZD2 1858 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 APC2O95996 2303 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 IGLL1P15814 213 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 KIAA1644Q3SXP7 199 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 NEUROG1Q92886 237 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 TRAV9-1A0A075B6T8 112 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 TRAV9-2A0A087WT02 112 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 REG1AP05451 166 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 SLC25A6P12236 298 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 LGALS4P56470 323 aa14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 ZNF324BQ6AW86 544 aaPredicted RBP14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 GMPPAQ96IJ6 420 aaPredicted RBP14.36□□□□□ -0.11
LDLRAP1-201ENST00000374338 C17orf112F2Z3M2 114 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 SMPD2O60906 423 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 SLC35B1P78383 322 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 PMCHL1Q16048 86 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 Q5PR19 223 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 FAM71F2Q6NXP2 309 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 OCC1Q8TAD7 63 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 TP73-AS1Q9UF72 201 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR2W1Q9Y3N9 320 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 RAMP3O60896 148 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 IGLV2-14P01704 120 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 ZNF816Q0VGE8 651 aaPredicted RBP14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 TBC1D28Q2M2D7 210 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 Q6ZR03 302 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 SFXN3Q9BWM7 321 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 KIR2DS1A0A191URI9 304 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 ZNF883P0CG24 379 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 KIR2DS4P43632 304 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 KIR2DS1Q14954 304 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR10J3Q5JRS4 329 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 Q6P435 159 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 C19orf35Q6ZS72 473 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 ZDHHC16Q969W1 377 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 BORCS7Q96B45 105 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 FAM234AQ9H0X4 552 aa14.35□□□□□ -0.11
LDLRAP1-201ENST00000374338 SPTA1P02549 2419 aa14.34□□□□□ -0.11
LDLRAP1-201ENST00000374338 SS18L1O75177 396 aaPredicted RBP14.34□□□□□ -0.11
LDLRAP1-201ENST00000374338 PSG9Q00887 426 aa14.34□□□□□ -0.11
LDLRAP1-201ENST00000374338 NHLH1Q02575 133 aa14.34□□□□□ -0.11
LDLRAP1-201ENST00000374338 OR4P4Q8NGL7 312 aa14.34□□□□□ -0.11
LDLRAP1-201ENST00000374338 QTRT1Q9BXR0 403 aaKnown RBP14.34□□□□□ -0.11
LDLRAP1-201ENST00000374338 GOSR1O95249 250 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 COX5AP20674 150 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 NTF3P20783 257 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 ZNF585BQ52M93 769 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 DEFB125Q8N687 156 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 C9orf106Q8NAJ2 232 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 WFDC12Q8WWY7 111 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 GNB1LQ9BYB4 327 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 NAT8BQ9UHF3 227 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 WASHC3Q9Y3C0 194 aa14.33□□□□□ -0.12
LDLRAP1-201ENST00000374338 ZZEF1O43149 2961 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms