RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MED13LQ71F56 2210 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 TEX50A0A1B0GTY4 177 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 E7EUB6 86 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 UPK2O00526 184 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 IGFBP2P18065 325 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 ABHD5Q8WTS1 349 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 A0A087WWC5 75 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 C11orf94C9JXX5 98 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 ARL14EPLP0DKL9 152 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 GATA2P23769 480 aaPredicted RBP13□□□□□ -0.33
CNKSR1-202ENST00000374253 APOBEC3AP31941 199 aaPredicted RBP13□□□□□ -0.33
CNKSR1-202ENST00000374253 MEF2CQ06413 473 aaPredicted RBP13□□□□□ -0.33
CNKSR1-202ENST00000374253 C10orf55Q5SWW7 151 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 KLF2Q9Y5W3 355 aaPredicted RBP13□□□□□ -0.33
CNKSR1-202ENST00000374253 ABCA1O95477 2261 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 H0YJW9 148 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 ACTL6BO94805 426 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 KBTBD11O94819 623 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 NPPCP23582 126 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 B2MP61769 119 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 RITA1Q96K30 269 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 DERL1Q9BUN8 251 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 NPVFQ9HCQ7 196 aa13□□□□□ -0.33
CNKSR1-202ENST00000374253 SEPSECSQ9HD40 501 aaKnown RBP13□□□□□ -0.33
CNKSR1-202ENST00000374253 C5orf52A6NGY3 159 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 IL6RP08887 468 aaPredicted RBP12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 STPG3Q8N7X2 389 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 OPRK1P41145 380 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 CASP6P55212 293 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 C12orf57Q99622 126 aa12.99□□□□□ -0.33
CNKSR1-202ENST00000374253 PGPEP1LA6NFU8 196 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 FOXH1O75593 365 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 APOA2P02652 100 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 TMEM241Q24JQ0 296 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 TEPPQ6URK8 271 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 MUC15Q8N387 334 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 MANBALQ9NQG1 85 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 NAT8Q9UHE5 227 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 LSM4Q9Y4Z0 139 aaKnown RBP12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 SPTAN1Q13813 2472 aaKnown RBP12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 CA7P43166 264 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 POU2AF1Q16633 256 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 TPSG1Q9NRR2 321 aa12.98□□□□□ -0.33
CNKSR1-202ENST00000374253 HIVEP3Q5T1R4 2406 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 SEC14L6B5MCN3 397 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 TRGC2P03986 189 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 APELAP0DMC3 54 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 PNRC1Q12796 327 aaPredicted RBP12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 C4orf17Q53FE4 359 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 C16orf82Q7Z2V1 217 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 ENSAO43768 121 aaKnown RBP12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 MPDU1O75352 247 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 SPNS3Q6ZMD2 512 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 NEIL1Q96FI4 390 aaPredicted RBP12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 SIRT7Q9NRC8 400 aa12.97□□□□□ -0.33
CNKSR1-202ENST00000374253 B9A039 149 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 CLDN34H7C241 214 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 MAS1LP35410 378 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 BSXQ3C1V8 233 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 CYP2G1PQ6ZSU1 146 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 MALSU1Q96EH3 234 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 NABP2Q9BQ15 211 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 ELOVL1Q9BW60 279 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.33
CNKSR1-202ENST00000374253 B4DEV8 164 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 NDUFB4O95168 129 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 REG1AP05451 166 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 HNF1AP20823 631 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 DLX6P56179 175 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 GNB1P62873 340 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 EFNB3Q15768 340 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 OR5AN1Q8NGI8 311 aa12.96□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM250H0YL14 139 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 SLC25A17O43808 307 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 LY86O95711 162 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 SLC16A13Q7RTY0 426 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 C11orf42Q8N5U0 333 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 OR10A7Q8NGE5 316 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 OR9G1Q8NH87 305 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 IGFBPL1Q8WX77 278 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 BET1LQ9NYM9 111 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 RPL8P62917 257 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 TMEM30BQ3MIR4 351 aa12.95□□□□□ -0.34
CNKSR1-202ENST00000374253 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1302.9 ms