RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CDX1P47902 265 aaPredicted RBP23.61■■□□□ 1.37
SSBP3-204ENST00000371320 STPG3Q8N7X2 389 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 NECAP1Q8NC96 275 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 RNASE6Q93091 150 aaKnown RBP23.61■■□□□ 1.37
SSBP3-204ENST00000371320 OR5B12Q96R08 314 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 TEX50A0A1B0GTY4 177 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 NDUFB3O43676 98 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 APOA2P02652 100 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 GNB1P62873 340 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 RBPJQ06330 500 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 SCNM1Q9BWG6 230 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 FKBP11Q9NYL4 201 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 BET1LQ9NYM9 111 aa23.61■■□□□ 1.37
SSBP3-204ENST00000371320 SAA1P0DJI8 122 aaPredicted RBP23.6■■□□□ 1.37
SSBP3-204ENST00000371320 S100PP25815 95 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 DYNLRB1Q9NP97 96 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 DMXL2Q8TDJ6 3036 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 FNDC10F2Z333 226 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 F6UZH7 168 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 GALR1P47211 349 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 RPL29P47914 159 aaKnown RBP23.6■■□□□ 1.37
SSBP3-204ENST00000371320 S100A12P80511 92 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 LRRC10Q5BKY1 277 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 LYPD2Q6UXB3 125 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 OSR1Q8TAX0 266 aaPredicted RBP23.6■■□□□ 1.37
SSBP3-204ENST00000371320 FRZBQ92765 325 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 NEUROG1Q92886 237 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 ANAPC16Q96DE5 110 aa23.6■■□□□ 1.37
SSBP3-204ENST00000371320 ROS1P08922 2347 aa23.59■■□□□ 1.37
SSBP3-204ENST00000371320 TRGC1P0CF51 173 aa23.59■■□□□ 1.37
SSBP3-204ENST00000371320 SHISA9B4DS77 424 aa23.58■■□□□ 1.37
SSBP3-204ENST00000371320 RHOBP62745 196 aa23.58■■□□□ 1.37
SSBP3-204ENST00000371320 EFNB3Q15768 340 aa23.58■■□□□ 1.37
SSBP3-204ENST00000371320 TXNDC17Q9BRA2 123 aa23.58■■□□□ 1.37
SSBP3-204ENST00000371320 PCNX1Q96RV3 2341 aa23.58■■□□□ 1.37
SSBP3-204ENST00000371320 E7EQL1 145 aa23.58■■□□□ 1.36
SSBP3-204ENST00000371320 TNFRSF13BO14836 293 aaPredicted RBP23.58■■□□□ 1.36
SSBP3-204ENST00000371320 NDUFB4O95168 129 aa23.58■■□□□ 1.36
SSBP3-204ENST00000371320 IGFBP2P18065 325 aa23.58■■□□□ 1.36
SSBP3-204ENST00000371320 OR5B3Q8NH48 314 aa23.58■■□□□ 1.36
SSBP3-204ENST00000371320 HARBI1Q96MB7 349 aa23.58■■□□□ 1.36
SSBP3-204ENST00000371320 H0YJW9 148 aa23.57■■□□□ 1.36
SSBP3-204ENST00000371320 OR5T1Q8NG75 326 aa23.57■■□□□ 1.36
SSBP3-204ENST00000371320 PYGO2Q9BRQ0 406 aa23.57■■□□□ 1.36
SSBP3-204ENST00000371320 SEPSECSQ9HD40 501 aaKnown RBP23.57■■□□□ 1.36
SSBP3-204ENST00000371320 NIT2Q9NQR4 276 aa23.57■■□□□ 1.36
SSBP3-204ENST00000371320 DCHS1Q96JQ0 3298 aa23.57■■□□□ 1.36
SSBP3-204ENST00000371320 OR10X1Q8NGY0 326 aa23.56■■□□□ 1.36
SSBP3-204ENST00000371320 REG1BP48304 166 aa23.56■■□□□ 1.36
SSBP3-204ENST00000371320 C4orf17Q53FE4 359 aa23.56■■□□□ 1.36
SSBP3-204ENST00000371320 DMRTC2Q8IXT2 367 aaPredicted RBP23.56■■□□□ 1.36
SSBP3-204ENST00000371320 OR5AN1Q8NGI8 311 aa23.56■■□□□ 1.36
SSBP3-204ENST00000371320 SRD5A3Q9H8P0 318 aa23.56■■□□□ 1.36
SSBP3-204ENST00000371320 IFITM10A6NMD0 228 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 DVL1O14640 695 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 ATP5IP56385 69 aaPredicted RBP23.55■■□□□ 1.36
SSBP3-204ENST00000371320 PRR20EP86478 221 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 PRR20CP86479 221 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 PRR20DP86480 221 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 PRR20BP86481 221 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 PRR20AP86496 221 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 SPATA31B1PQ5VZV4 182 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 DERL1Q9BUN8 251 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 PHOX2AO14813 284 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 FAM87AP0C7U9 286 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 GCHFRP30047 84 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 C2orf83Q53S99 150 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 LINC01551Q86U37 167 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 FLYWCH2Q96CP2 140 aaKnown RBP23.55■■□□□ 1.36
SSBP3-204ENST00000371320 ELOVL1Q9BW60 279 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 CTSZQ9UBR2 303 aa23.55■■□□□ 1.36
SSBP3-204ENST00000371320 SMG1Q96Q15 3661 aaKnown RBP23.54■■□□□ 1.36
SSBP3-204ENST00000371320 FAM122AQ96E09 287 aa23.54■■□□□ 1.36
SSBP3-204ENST00000371320 VKORC1Q9BQB6 163 aa23.54■■□□□ 1.36
SSBP3-204ENST00000371320 PPP1R2P9O14990 202 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 TMEM177Q53S58 311 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 TMEM144Q7Z5S9 345 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 S100A2P29034 98 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 CHRNB4P30926 498 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 TMEM204Q9BSN7 226 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 COMMD5Q9GZQ3 224 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 GAR1Q9NY12 217 aaKnown RBP23.53■■□□□ 1.36
SSBP3-204ENST00000371320 SLC45A2Q9UMX9 530 aa23.53■■□□□ 1.36
SSBP3-204ENST00000371320 LINC00869P0C866 280 aa23.52■■□□□ 1.36
SSBP3-204ENST00000371320 MOB3BQ86TA1 216 aa23.52■■□□□ 1.36
SSBP3-204ENST00000371320 OR10W1Q8NGF6 305 aa23.52■■□□□ 1.36
SSBP3-204ENST00000371320 OR1L8Q8NGR8 309 aa23.52■■□□□ 1.36
SSBP3-204ENST00000371320 ELOA3CA0A087WX78 387 aaPredicted RBP23.52■■□□□ 1.35
SSBP3-204ENST00000371320 RNASE2P10153 161 aaKnown RBP23.52■■□□□ 1.35
SSBP3-204ENST00000371320 LOXP28300 417 aaPredicted RBP23.52■■□□□ 1.35
SSBP3-204ENST00000371320 RPL8P62917 257 aaKnown RBP23.52■■□□□ 1.35
SSBP3-204ENST00000371320 LINC00311Q8N616 119 aa23.52■■□□□ 1.35
SSBP3-204ENST00000371320 C8orf31Q8N9H6 132 aa23.52■■□□□ 1.35
SSBP3-204ENST00000371320 TMEM186Q96B77 213 aa23.52■■□□□ 1.35
SSBP3-204ENST00000371320 YTHDF2Q9Y5A9 579 aaKnown RBP23.52■■□□□ 1.35
SSBP3-204ENST00000371320 PPP5D1E7EU14 171 aa23.51■■□□□ 1.35
SSBP3-204ENST00000371320 MT-CO2P00403 227 aa23.51■■□□□ 1.35
SSBP3-204ENST00000371320 NHLH1Q02575 133 aa23.51■■□□□ 1.35
SSBP3-204ENST00000371320 CLEC12BQ2HXU8 276 aa23.51■■□□□ 1.35
SSBP3-204ENST00000371320 FAM71F2Q6NXP2 309 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms