RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 SFRP2Q96HF1 295 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 SERTAD4Q9NUC0 356 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 MGST1P10620 155 aaKnown RBP13.55□□□□□ -0.24
TRIM9-202ENST00000338969 LOXL3P58215 753 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 SEM1Q6ZVN7 128 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 OR10W1Q8NGF6 305 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 OR10G8Q8NGN5 311 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 TMEM18Q96B42 140 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 PARD6GQ9BYG4 376 aaPredicted RBP13.55□□□□□ -0.24
TRIM9-202ENST00000338969 JPT1Q9UK76 154 aa13.55□□□□□ -0.24
TRIM9-202ENST00000338969 GCHFRP30047 84 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 VDAC2P45880 294 aaPredicted RBP13.54□□□□□ -0.24
TRIM9-202ENST00000338969 FAM90A1Q86YD7 464 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 DOLPP1Q86YN1 238 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 H1FXQ92522 213 aaKnown RBP13.54□□□□□ -0.24
TRIM9-202ENST00000338969 SLC25A15Q9Y619 301 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 TRGV10A0A0A0MS01 117 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 IER3P46695 156 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 HTD2P86397 168 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 FAM103A1Q9BTL3 118 aaKnown RBP13.54□□□□□ -0.24
TRIM9-202ENST00000338969 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 PDE6DO43924 150 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 PLAUP00749 431 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 CRYBB3P26998 211 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 JOSD1Q15040 202 aaPredicted RBP13.54□□□□□ -0.24
TRIM9-202ENST00000338969 EFNB3Q15768 340 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 TEPPQ6URK8 271 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 CISD2Q8N5K1 135 aaKnown RBP13.54□□□□□ -0.24
TRIM9-202ENST00000338969 ATG101Q9BSB4 218 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 PLEKHA3Q9HB20 300 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 NPVFQ9HCQ7 196 aa13.54□□□□□ -0.24
TRIM9-202ENST00000338969 ADMP35318 185 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 ZNF600Q6ZNG1 722 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 PIP4P1Q86T03 277 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 J3QR06 171 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 OR10J1P30954 320 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 SGK494Q96LW2 274 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 CBLN4Q9NTU7 201 aa13.53□□□□□ -0.24
TRIM9-202ENST00000338969 GATCO43716 136 aaKnown RBP13.52□□□□□ -0.24
TRIM9-202ENST00000338969 CXorf1O96002 111 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 CCL3L1P16619 93 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 DLX1P56177 255 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 ACTL10Q5JWF8 245 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 OR9G1Q8NH87 305 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 PLSCR4Q9NRQ2 329 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 SLC35D1Q9NTN3 355 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 RYDENQ9NUL5 291 aaKnown RBP13.52□□□□□ -0.24
TRIM9-202ENST00000338969 ZZEF1O43149 2961 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 TM4SF5O14894 197 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.24
TRIM9-202ENST00000338969 RAB31Q13636 194 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 C10orf55Q5SWW7 151 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 MISP3Q96FF7 219 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 PYGO2Q9BRQ0 406 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 KCNIP2Q9NS61 270 aa13.52□□□□□ -0.24
TRIM9-202ENST00000338969 IGHV3-21A0A0B4J1V1 117 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 YPEL1O60688 119 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 OPRK1P41145 380 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 C17orf58Q2M2W7 97 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 DMRTC2Q8IXT2 367 aaPredicted RBP13.52□□□□□ -0.25
TRIM9-202ENST00000338969 MS4A10Q96PG2 267 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 YPEL2Q96QA6 119 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 RPH3ALQ9UNE2 315 aa13.52□□□□□ -0.25
TRIM9-202ENST00000338969 ZNF891A8MT65 544 aaPredicted RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 F2Z2F3 143 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 STAG3L2P0CL84 134 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 STAG3L3P0CL85 134 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 SELENOVP59797 346 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 CHRNB4P30926 498 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 SRP14P37108 136 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 RHOBP62745 196 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 SUMO1P63165 101 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 PAX5Q02548 391 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 BAGE3Q86Y29 109 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 BAGE2Q86Y30 109 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 RNASE7Q9H1E1 156 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 RALYQ9UKM9 306 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 COL12A1Q99715 3063 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 MALRD1Q5VYJ5 2156 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 LRBAP50851 2863 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 SRRM4A7MD48 611 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 IGLV1-44P01699 117 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 MBNL2Q5VZF2 373 aaKnown RBP13.51□□□□□ -0.25
TRIM9-202ENST00000338969 PQLC2Q6ZP29 291 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 UHRF2Q96PU4 802 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 FKBP11Q9NYL4 201 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 RNF7Q9UBF6 113 aa13.51□□□□□ -0.25
TRIM9-202ENST00000338969 TRAV5A0A0B4J249 113 aa13.5□□□□□ -0.25
TRIM9-202ENST00000338969 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
TRIM9-202ENST00000338969 CA1P00915 261 aaPredicted RBP13.5□□□□□ -0.25
TRIM9-202ENST00000338969 MZT1Q08AG7 82 aa13.5□□□□□ -0.25
TRIM9-202ENST00000338969 GUSBP1Q15486 140 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms