RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CASTOR1Q8WTX7 329 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 MITD1Q8WV92 249 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 FYTTD1Q96QD9 318 aaKnown RBP14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 GPN1Q9HCN4 374 aaPredicted RBP14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 NDUFA4L2Q9NRX3 87 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 TEX50A0A1B0GTY4 177 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 A0A1B0GU03 582 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 TCRBV4S1A1TA0A5B7 111 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 TEX22C9J3V5 150 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 IFNA21P01568 189 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 NMSQ5H8A3 153 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 C10orf55Q5SWW7 151 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 OR1L6Q8NGR2 347 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 MARVELD1Q9BSK0 173 aa14.02□□□□□ -0.17
SSSCA1-201ENST00000309328 TENM1Q9UKZ4 2725 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 A0A0B4J293 547 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 M0QZ24 198 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 CRYGCP07315 174 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 PRCDQ00LT1 54 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 SMCO1Q147U7 214 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 C2orf68Q2NKX9 166 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 ANKRD55Q3KP44 614 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 PDLIM3Q53GG5 364 aaPredicted RBP14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 LYZL2Q7Z4W2 148 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 ZNF431Q8TF32 576 aaPredicted RBP14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 CACNG5Q9UF02 275 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 NSG2Q9Y328 171 aa14.01□□□□□ -0.17
SSSCA1-201ENST00000309328 A0A0G2JLM5 398 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 INMT-MINDY4F8WBC2 141 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 INS-IGF2F8WCM5 200 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 IFNA17P01571 189 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 PF4V1P10720 104 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 CD28P10747 220 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
SSSCA1-201ENST00000309328 PSMB6P28072 239 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 CDX1P47902 265 aaPredicted RBP14□□□□□ -0.17
SSSCA1-201ENST00000309328 RAB9AP51151 201 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 SPCS3P61009 180 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 FAM209BQ5JX69 171 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 MYOZ3Q8TDC0 251 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 GPR146Q96CH1 333 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 USMG5Q96IX5 58 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 PLEKHA3Q9HB20 300 aa14□□□□□ -0.17
SSSCA1-201ENST00000309328 IGLC7A0M8Q6 106 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 SNRPGP15A8MWD9 76 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 FAM90A26D6RGX4 464 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 KRTAP10-3P60369 221 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 RPL23AP62750 156 aaKnown RBP13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 ERHP84090 104 aaKnown RBP13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 RGS21Q2M5E4 152 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 ASPHD1Q5U4P2 390 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 CITED2Q99967 270 aaPredicted RBP13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 HINT2Q9BX68 163 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 ENY2Q9NPA8 101 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 THYN1Q9P016 225 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 TNCP24821 2201 aa13.99□□□□□ -0.17
SSSCA1-201ENST00000309328 A0A0G2JRQ6 117 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 FAM223BA6NKX1 122 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 ST8SIA3O43173 380 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 SOX15O60248 233 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 LY86O95711 162 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 DEFA4P12838 97 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 CTRB1P17538 263 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 KLK9Q2XQG4 91 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 TCTEX1D4Q5JR98 221 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 KHDC1LQ5JSQ8 128 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 CTRB2Q6GPI1 263 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 FAM223AQ8IWN6 122 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 OR5T1Q8NG75 326 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 OR4F17Q8NGA8 305 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 OR4F4Q96R69 305 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 ZNF355PQ9NSJ1 428 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 KLK9Q9UKQ9 250 aa13.98□□□□□ -0.17
SSSCA1-201ENST00000309328 A0A1B0GW64 132 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 HMX3A6NHT5 357 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 E7EUB6 86 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 TRGV3P03979 118 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 TPPP2P59282 170 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 C10orf99Q6UWK7 81 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 Q6ZRM9 215 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 C11orf44Q8N8P7 122 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 ZNF114Q8NC26 417 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 NECAP1Q8NC96 275 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 OR1S1Q8NH92 325 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 PRR13Q9NZ81 148 aa13.97□□□□□ -0.17
SSSCA1-201ENST00000309328 CGB1A6NKQ9 187 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 MED6O75586 246 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 RPLP1P05386 114 aaKnown RBP13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 HOXB5P09067 269 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 OR13C7P0DN81 318 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 AREGP15514 252 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 HOXA1P49639 335 aaPredicted RBP13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 SUB1P53999 127 aaKnown RBP eCLIP13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 IZUMO4Q1ZYL8 232 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 GGNBP1Q5YKI7 109 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 C12orf45Q8N5I9 185 aaPredicted RBP13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
SSSCA1-201ENST00000309328 PLXNB1O43157 2135 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms