RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PARLQ9H300 379 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 C6orf106Q9H6K1 298 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 MALRD1Q5VYJ5 2156 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 MOB3BQ86TA1 216 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 OR8A1Q8NGG7 326 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 A0A1W2PPE3 182 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 INAFM2P0DMQ5 153 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 HOXA5P20719 270 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 ZNF324BQ6AW86 544 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEM37Q8WXS4 190 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TTTY12Q9BZ98 90 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 HS3ST3B1Q9Y662 390 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 UBE2L6O14933 153 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 CXCL13O43927 109 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 OR2J3O76001 311 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 BCDIN3DQ7Z5W3 292 aaKnown RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 FGF16O43320 207 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 MPZL1O95297 269 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 CCL3P10147 92 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 PLP1P60201 277 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 THSD4Q6ZMP0 1018 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 NIT1Q86X76 327 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 GPR146Q96CH1 333 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 RFNGQ9Y644 331 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 DOPEY2Q9Y3R5 2298 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 IGKV1-8A0A0C4DH67 115 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEM189A5PLL7 270 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 GDF9O60383 454 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 PSMB2P49721 201 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 LHFPL4Q7Z7J7 247 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 NUDT8Q8WV74 236 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 UFC1Q9Y3C8 167 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 IFITM10A6NMD0 228 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 HSPB6O14558 160 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 ZNF324O75467 553 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEM187Q14656 261 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 DOK4Q8TEW6 326 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 DPM3Q9P2X0 92 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 E9PLN8 166 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 RHODO00212 210 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 IL15RAQ13261 267 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEFF1Q8IYR6 380 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 SAP25Q8TEE9 199 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 IGFBPL1Q8WX77 278 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 VKORC1Q9BQB6 163 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 FABP5P3A8MUU1 101 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 RPL27AP46776 148 aaKnown RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 PCP4P48539 62 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 ZNF415Q09FC8 603 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 ZNF774Q6NX45 483 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 Q8NFD4 153 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 RPRMQ9NS64 109 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 RBAKDNA6NC62 111 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 REG1BP48304 166 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 GFERP55789 205 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 LHFPL1Q86WI0 220 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 NRTNQ99748 197 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 PCDH15Q96QU1 1955 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 IGHV1-69-2A0A0G2JMI3 117 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 SMIM13P0DJ93 91 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 SPNS3Q6ZMD2 512 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMUB1Q9BVT8 246 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEM106BQ9NUM4 274 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 FUT9Q9Y231 359 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEM42Q69YG0 159 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 CBLN3Q6UW01 205 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 DMRTC2Q8IXT2 367 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 C12orf49Q9H741 205 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 GEMIN7Q9H840 131 aaKnown RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 IDI2-AS1Q9NZ38 188 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 RNF115Q9Y4L5 304 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 CHCHD2Q9Y6H1 151 aaPredicted RBP3.41□□□□□ -1.86
USH2A-201ENST00000307340 H2BFSP57053 126 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TAL2Q16559 108 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 HEPN1Q6WQI6 88 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TSKUQ8WUA8 353 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TRGV11A0A075B6L2 103 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 RRN3P1Q2M238 152 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 NBEAP1P0C6P0 100 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 FAM231DQ6ZW35 169 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 TMEM123Q8N131 208 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 NPFFR1Q9GZQ6 430 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 CALYQ9NYX4 217 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 CYSLTR1Q9Y271 337 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 A0A1B0GVG6 124 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 SOCS1O15524 211 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 TMEM50AO95807 157 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 CCL7P80098 99 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 LRRC29Q8WV35 223 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 MSL2Q9HCI7 577 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 NOTCH4Q99466 2003 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 TM4SF20Q53R12 229 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 C2orf83Q53S99 150 aa3.4□□□□□ -1.86
USH2A-201ENST00000307340 MRAP2Q96G30 205 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms