RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 RAB9AP51151 201 aa14.45□□□□□ -0.1
CDCP1-201ENST00000296129 RRN3P1Q2M238 152 aa14.45□□□□□ -0.1
CDCP1-201ENST00000296129 SRIP30626 198 aa14.44□□□□□ -0.1
CDCP1-201ENST00000296129 FAM89BQ8N5H3 189 aa14.44□□□□□ -0.1
CDCP1-201ENST00000296129 FOXI3A8MTJ6 420 aaPredicted RBP14.44□□□□□ -0.1
CDCP1-201ENST00000296129 KIAA1644Q3SXP7 199 aa14.44□□□□□ -0.1
CDCP1-201ENST00000296129 FBXL7Q9UJT9 491 aa14.44□□□□□ -0.1
CDCP1-201ENST00000296129 SIAH2O43255 324 aa14.44□□□□□ -0.1
CDCP1-201ENST00000296129 DDB2Q92466 427 aa14.44□□□□□ -0.1
CDCP1-201ENST00000296129 ARPC1AQ92747 370 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 IGHV3-49A0A0A0MS15 119 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 M0QZK8 103 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 GGCTO75223 188 aaKnown RBP14.43□□□□□ -0.1
CDCP1-201ENST00000296129 SAA1P0DJI8 122 aaPredicted RBP14.43□□□□□ -0.1
CDCP1-201ENST00000296129 ICAM4Q14773 271 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 RAX2Q96IS3 184 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 ZNF207O43670 478 aaKnown RBP14.43□□□□□ -0.1
CDCP1-201ENST00000296129 A6NDN8 102 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 PPP1R27Q86WC6 154 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 ZNF502Q8TBZ5 544 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 HIST1H2BAQ96A08 127 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 YPEL1O60688 119 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 RAMP3O60896 148 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 C2orf83Q53S99 150 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 FAM131CQ96AQ9 280 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 YPEL2Q96QA6 119 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 MAP1LC3AQ9H492 121 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 SVILO95425 2214 aa14.43□□□□□ -0.1
CDCP1-201ENST00000296129 IGKV1D-8A0A087WSZ0 117 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 ZNF98A6NK75 572 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 RPLP1P05386 114 aaKnown RBP14.42□□□□□ -0.1
CDCP1-201ENST00000296129 MORN2Q502X0 79 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 ZNF525Q8N782 197 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 DLX6P56179 175 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.42□□□□□ -0.1
CDCP1-201ENST00000296129 M0R3E3 92 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 OR1N2Q8NGR9 330 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 NUDT3O95989 172 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 HIST1H1AQ02539 215 aaPredicted RBP14.42□□□□□ -0.1
CDCP1-201ENST00000296129 SPATA45Q537H7 98 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 RNF126Q9BV68 326 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 TMEM250H0YL14 139 aa14.42□□□□□ -0.1
CDCP1-201ENST00000296129 IGKV1-12A0A0C4DH73 117 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 LYNX1G3V0Z9 82 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 IGKV1D-12P01611 117 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 LYNX1P0DP58 116 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 SMUG1Q53HV7 270 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 BIVMQ86UB2 503 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 SCO2A0A1W2PP80 73 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 CBLN4Q9NTU7 201 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 CBY1Q9Y3M2 126 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 GRIFINA4D1Z8 144 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 IGKV3-20P01619 116 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 GATA2P23769 480 aaPredicted RBP14.41□□□□□ -0.1
CDCP1-201ENST00000296129 TEX45Q8NA69 505 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 MGAMO43451 1857 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 UBE2L6O14933 153 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 LY6G6FQ5SQ64 297 aa14.41□□□□□ -0.1
CDCP1-201ENST00000296129 ZNF324BQ6AW86 544 aaPredicted RBP14.41□□□□□ -0.1
CDCP1-201ENST00000296129 LEPROTL1O95214 131 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 NBEAP1P0C6P0 100 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 TRGC1P0CF51 173 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 MIR17HGQ75NE6 70 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 WFIKKN1Q96NZ8 548 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 SCN8AQ9UQD0 1980 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 LY6DQ14210 128 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 ELOVL1Q9BW60 279 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 ARTNQ5T4W7 220 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 THADAQ6YHU6 1953 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 GPR183P32249 361 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 ATP5G3P48201 142 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 SNRPD3P62318 126 aaKnown RBP14.4□□□□□ -0.1
CDCP1-201ENST00000296129 CLDND2Q8NHS1 167 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 UPK2O00526 184 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 C21orf62Q9NYP8 219 aa14.4□□□□□ -0.1
CDCP1-201ENST00000296129 RBFOX2O43251 390 aaKnown RBP eCLIP14.39□□□□□ -0.11
CDCP1-201ENST00000296129 IGHV1-46P01743 117 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 ZNF25P17030 456 aaPredicted RBP14.39□□□□□ -0.11
CDCP1-201ENST00000296129 WNT10AQ9GZT5 417 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 C7orf69Q9H7B7 122 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 NAT1P18440 290 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 TBR1Q16650 682 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 GPR82Q96P67 336 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 VENTXO95231 258 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 MBNL2Q5VZF2 373 aaKnown RBP14.39□□□□□ -0.11
CDCP1-201ENST00000296129 RNASEH2CQ8TDP1 164 aaKnown RBP14.39□□□□□ -0.11
CDCP1-201ENST00000296129 IGKV1-27A0A075B6S5 117 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 IGHV3OR16-8A0A075B7F1 116 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 E9PLN8 166 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 SRP19P09132 144 aaKnown RBP14.39□□□□□ -0.11
CDCP1-201ENST00000296129 VKORC1Q9BQB6 163 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 TSPOP30536 169 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 SMAGPQ0VAQ4 97 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 ATG101Q9BSB4 218 aa14.39□□□□□ -0.11
CDCP1-201ENST00000296129 TRBV9A0A0B4J1U6 114 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 CLEC19AQ6UXS0 136 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 C15orf61A6NNL5 157 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 OTX1P32242 354 aaPredicted RBP14.38□□□□□ -0.11
CDCP1-201ENST00000296129 TMEM133Q9H2Q1 129 aa14.38□□□□□ -0.11
CDCP1-201ENST00000296129 ZNF324O75467 553 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms