RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TMEM238LA0A1B0GVL6 79 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 A6NJY4 79 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 EGR1P18146 543 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 TCF24Q7RTU0 167 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 LOC107984156A0A0G2JMH3 177 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 C7orf71A4D174 169 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 THBDP07204 575 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 ARL17AQ8IVW1 177 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 MARVELD3Q96A59 401 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 PARLQ9H300 379 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 SEMA5BQ9P283 1151 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 CD24P25063 80 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 TBR1Q16650 682 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 SPATA45Q537H7 98 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 CENPWQ5EE01 88 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 M0R381 172 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 FHITP49789 147 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 DMRTA2Q96SC8 542 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 MSGN1A6NI15 193 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 RBFOX2O43251 390 aaKnown RBP eCLIP14.54□□□□□ -0.08
SHANK1-201ENST00000293441 RPLP1P05386 114 aaKnown RBP14.54□□□□□ -0.08
SHANK1-201ENST00000293441 SRIP30626 198 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 TFF3Q07654 80 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 WNT10AQ9GZT5 417 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 LOC102723996A0A087X1L8 192 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 FBLL1A6NHQ2 334 aaKnown RBP14.54□□□□□ -0.08
SHANK1-201ENST00000293441 RNASE4P34096 147 aaKnown RBP14.54□□□□□ -0.08
SHANK1-201ENST00000293441 SFRP2Q96HF1 295 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 NYNRINQ9P2P1 1898 aaKnown RBP14.54□□□□□ -0.08
SHANK1-201ENST00000293441 CIRBPQ14011 172 aaKnown RBP14.54□□□□□ -0.08
SHANK1-201ENST00000293441 WDR82Q6UXN9 313 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 GATAD1Q8WUU5 269 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 LINC01587Q99440 93 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 HIST1H4GQ99525 98 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 NMBP08949 121 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 SAPCD1Q5SSQ6 148 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 PET117Q6UWS5 81 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 NPCDR1Q9BY65 106 aa14.54□□□□□ -0.08
SHANK1-201ENST00000293441 COX6CP09669 75 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 PKIAP61925 76 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 OR4D5Q8NGN0 318 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 PQLC2LA1A4F0 135 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 PEMTQ9UBM1 199 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 IGHV1-18A0A0C4DH31 117 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 NBEAP1P0C6P0 100 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 SUMO2P61956 95 aaKnown RBP14.53□□□□□ -0.08
SHANK1-201ENST00000293441 GPR61Q9BZJ8 451 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 TNFRSF18Q9Y5U5 241 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 M0QZK8 103 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 GGCTO75223 188 aaKnown RBP14.53□□□□□ -0.08
SHANK1-201ENST00000293441 CGAP01215 116 aa14.53□□□□□ -0.08
SHANK1-201ENST00000293441 HLA-DRB1P01911 266 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 DANCRP0C864 163 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 ATP5IP56385 69 aaPredicted RBP14.52□□□□□ -0.08
SHANK1-201ENST00000293441 FAM90A1Q86YD7 464 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 TMEM101Q96IK0 257 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 MESP1Q9BRJ9 268 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 TRIOBPQ9H2D6 2365 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 ASIPP42127 132 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 LINC00114Q6XXX2 140 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 NPFFR1Q9GZQ6 430 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 SNRNP200O75643 2136 aaKnown RBP14.52□□□□□ -0.08
SHANK1-201ENST00000293441 MUC21A0A0G2JKD1 596 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 MUC21A0A140T8X8 626 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 MUC21Q5SSG8 566 aa14.52□□□□□ -0.08
SHANK1-201ENST00000293441 E9PLN8 166 aa14.52□□□□□ -0.09
SHANK1-201ENST00000293441 C11orf44Q8N8P7 122 aa14.52□□□□□ -0.09
SHANK1-201ENST00000293441 PLPPR1Q8TBJ4 325 aa14.52□□□□□ -0.09
SHANK1-201ENST00000293441 VKORC1Q9BQB6 163 aa14.52□□□□□ -0.09
SHANK1-201ENST00000293441 COL25A1Q9BXS0 654 aaPredicted RBP14.52□□□□□ -0.09
SHANK1-201ENST00000293441 A0A0G2JMZ2 1700 aa14.52□□□□□ -0.09
SHANK1-201ENST00000293441 LRRC37A2A6NM11 1700 aa14.52□□□□□ -0.09
SHANK1-201ENST00000293441 TRAV24A0A0B4J272 114 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 SMIM6P0DI80 62 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 F11RQ9Y624 299 aaKnown RBP14.51□□□□□ -0.09
SHANK1-201ENST00000293441 OR10AG1Q8NH19 301 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 FLVCR1-AS1Q8TAF5 88 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 HEATR5BQ9P2D3 2071 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 RALGAPA1Q6GYQ0 2036 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 SAA2-SAA4A0A096LPE2 208 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 SAA2P0DJI9 122 aaPredicted RBP14.51□□□□□ -0.09
SHANK1-201ENST00000293441 NSUN5P1Q3KNT7 163 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 GCSAMLQ5JQS6 135 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 OR1P1Q8NH06 330 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 NTN3O00634 580 aaPredicted RBP14.51□□□□□ -0.09
SHANK1-201ENST00000293441 C2orf68Q2NKX9 166 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 METRNQ9UJH8 293 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 NBR2O15453 112 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 FOXF2Q12947 444 aa14.51□□□□□ -0.09
SHANK1-201ENST00000293441 Q5BKY6 102 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 WBP1Q96G27 269 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 PRSS22Q9GZN4 317 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 ZNF256Q9Y2P7 627 aaPredicted RBP14.5□□□□□ -0.09
SHANK1-201ENST00000293441 LBHQ53QV2 105 aaPredicted RBP14.5□□□□□ -0.09
SHANK1-201ENST00000293441 LAIR2Q6ISS4 152 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 PUSL1Q8N0Z8 303 aaKnown RBP14.5□□□□□ -0.09
SHANK1-201ENST00000293441 OR13C6PQ8NH95 151 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 GLMPQ8WWB7 406 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 NPIPB7O75200 414 aa14.5□□□□□ -0.09
SHANK1-201ENST00000293441 SAA1P0DJI8 122 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms