RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 NPIPB4C9JG80 1138 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 LAMTOR1Q6IAA8 161 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 C1QL4Q86Z23 238 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 COPS9Q8WXC6 57 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 TMEM101Q96IK0 257 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 RPS20P60866 119 aaKnown RBP14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 ABCA3Q99758 1704 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 TRAV8-4A0A0B4J246 113 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 PRR32B1ATL7 298 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 NBEAP1P0C6P0 100 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 C1QTNF9P0C862 333 aa14.22□□□□□ -0.13
TSPAN3-201ENST00000267970 PF4P02776 101 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 PRR33A8MZF0 331 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 DEPPQ9NTK1 212 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 TRAV2A0A0B4J234 112 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 ZNF146Q15072 292 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 FAM216BQ8N7L0 139 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 SIGMAR1Q99720 223 aa14.21□□□□□ -0.13
TSPAN3-201ENST00000267970 PRTN3P24158 256 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 SMRP1Q8NCR6 262 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 CLEC7AQ9BXN2 247 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 LIPFP07098 398 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 FAM27E3Q08E93 113 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 PIMREGQ9BSJ6 248 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 HS3ST3B1Q9Y662 390 aa14.21□□□□□ -0.14
TSPAN3-201ENST00000267970 HOXA5P20719 270 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 LINC01590Q5TEZ4 76 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 LAMTOR2Q9Y2Q5 125 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 HIGD1CA8MV81 97 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 CELA3BP08861 270 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 SRP19P09132 144 aaKnown RBP14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 SNRPD3P62318 126 aaKnown RBP14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 DMRTC2Q8IXT2 367 aaPredicted RBP14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 ZNF48Q96MX3 618 aaPredicted RBP14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 RTBDNQ9BSG5 229 aaPredicted RBP14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 SVILO95425 2214 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 TDGF1P13385 188 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 ZNF837Q96EG3 531 aaPredicted RBP14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 CCL19Q99731 98 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 A0A0G2JMM0 328 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 A0A1W2PPB8 328 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 A0A1W2PRS3 328 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 KIR3DP1A8MWS1 328 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 COX6A1P12074 109 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 C11orf44Q8N8P7 122 aa14.2□□□□□ -0.14
TSPAN3-201ENST00000267970 OR5P3Q8WZ94 311 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 VKORC1Q9BQB6 163 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 JPT1Q9UK76 154 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 A0A1W2PQM1 296 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 HIST1H4AP62805 103 aaKnown RBP14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 CD200R1LQ6Q8B3 271 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 OR13A1Q8NGR1 328 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 CLDND2Q8NHS1 167 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 FGF5P12034 268 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 TMEM249Q2WGJ8 235 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 STPG1Q5TH74 334 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 SIGLEC12Q96PQ1 595 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 PSMG3Q9BT73 122 aaPredicted RBP14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 SHISA5Q8N114 240 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 PQLC2LA1A4F0 135 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 TMEM14DPA8MWL7 114 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 ASIPP42127 132 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
TSPAN3-201ENST00000267970 TRAV14DV4A0A0A6YYC5 116 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 UNQ9370/PRO34162Q6UXP9 181 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 OR9G1Q8NH87 305 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 ZCCHC24Q8N2G6 241 aaKnown RBP14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 FBLIM1Q8WUP2 373 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 NEUROG1Q92886 237 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 LINC01587Q99440 93 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 CITED1Q99966 193 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 Q9H3A6 140 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 ASCL4Q6XD76 172 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 C12orf77C9JDV5 145 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 GZMBP10144 247 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 NHSQ6T4R5 1651 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 TUBA4BQ9H853 241 aa14.18□□□□□ -0.14
TSPAN3-201ENST00000267970 TSPAN7P41732 249 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 MRPL20Q9BYC9 149 aaKnown RBP14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 RPP21Q9H633 154 aaKnown RBP14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 TRBV9A0A0B4J1U6 114 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 CNTFRP26992 372 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 ZXDCQ2QGD7 858 aaPredicted RBP14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 NRN1Q9NPD7 142 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 PYYP10082 97 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 PKIBQ9C010 78 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 ZNF124Q15973 351 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 FHL5Q5TD97 284 aa14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 MRPL32Q9BYC8 188 aaKnown RBP14.17□□□□□ -0.14
TSPAN3-201ENST00000267970 OR52E5Q8NH55 327 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 IFI27L2Q9H2X8 130 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 HEATR5BQ9P2D3 2071 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 PCOLCEQ15113 449 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 C2orf88Q9BSF0 95 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 RAMP3O60896 148 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 SLC25A28Q96A46 364 aa14.16□□□□□ -0.14
TSPAN3-201ENST00000267970 EDA2RQ9HAV5 297 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms