RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MGST3O14880 152 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 FAM87AP0C7U9 286 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 RAB4AP20338 218 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 MLANAQ16655 118 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 HLA-DRB5Q30154 266 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 PEAR1Q5VY43 1037 aaPredicted RBP13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 Q6ZT83 130 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 SLC31A2O15432 143 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 FOXH1O75593 365 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 SLC35E4Q6ICL7 350 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 TMEM14EPQ6UXP3 125 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 FAM19A2Q8N3H0 131 aa13.47□□□□□ -0.25
PDZRN3-201ENST00000263666 PPIHO43447 177 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 COX7A1P24310 79 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 GCHFRP30047 84 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 ODF3L1Q8IXM7 274 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 ABHD17AQ96GS6 310 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 SEPSECSQ9HD40 501 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 RAB9BQ9NP90 201 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 SLC45A2Q9UMX9 530 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 NKX6-3A6NJ46 265 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 ZNF114Q8NC26 417 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 TECRQ9NZ01 308 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 COL6A3P12111 3177 aa13.46□□□□□ -0.25
PDZRN3-201ENST00000263666 TRBV24-1A0A075B6N3 115 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 SLC25A5P05141 298 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 MFAP2P55001 183 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 UCNP55089 124 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 NRN1LQ496H8 165 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 ZNF664Q8N3J9 261 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 OR2D3Q8NGH3 330 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 OR1B1Q8NGR6 318 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 HES4Q9HCC6 221 aa13.46□□□□□ -0.26
PDZRN3-201ENST00000263666 A0A1B0GW64 132 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 CNIH1O95406 144 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 TDGF1P13385 188 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 ADMP35318 185 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 CENPWQ5EE01 88 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 MMD2Q8IY49 270 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 PRR7Q8TB68 274 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 HES1Q14469 280 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 WNT10AQ9GZT5 417 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 ARL2-SNX15V9GYD0 113 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 CTAG1AP78358 180 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 FAM27E3Q08E93 113 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 COL25A1Q9BXS0 654 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 FAM208BQ5VWN6 2430 aa13.45□□□□□ -0.26
PDZRN3-201ENST00000263666 GZMBP10144 247 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 CCKARP32238 428 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 TMPRSS3P57727 454 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 CD177Q8N6Q3 437 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 NABP2Q9BQ15 211 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 SNRNP40Q96DI7 357 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 RALYQ9UKM9 306 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 SERF1AO75920 110 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 OR4A47Q6IF82 309 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 LINC01551Q86U37 167 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 CORO2AQ92828 525 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 TRAV1-1A0A0B4J248 108 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 SRIP30626 198 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 DUTP33316 252 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 JOSD1Q15040 202 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 ZNF146Q15072 292 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 Q56UQ5 140 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 DUX4L9Q6RFH8 374 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 TREML4Q6UXN2 200 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 ASCL5Q7RTU5 278 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 OR10W1Q8NGF6 305 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 RNF7Q9UBF6 113 aa13.44□□□□□ -0.26
PDZRN3-201ENST00000263666 A6NNC1 897 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 IQCF6A8MYZ5 107 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 AHRRA9YTQ3 701 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 TIMP3P35625 211 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 DIRC3C9JPN6 131 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 LINC00869P0C866 280 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 HSPE1P61604 102 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 TMEM108Q6UXF1 575 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 Q6ZN92 141 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 STARD4Q96DR4 205 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 TANC2Q9HCD6 1990 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 ACACBO00763 2458 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 RAB7AP51149 207 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 TMEM183BQ1AE95 376 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 Q6ZR03 302 aa13.43□□□□□ -0.26
PDZRN3-201ENST00000263666 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 C10orf55Q5SWW7 151 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 ST6GALNAC3Q8NDV1 305 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 FLYWCH2Q96CP2 140 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 GCGP01275 180 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 CCL3L1P16619 93 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 OR9G1Q8NH87 305 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 TMEM170AQ8WVE7 144 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 CEP192Q8TEP8 1941 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 MOSP00540 346 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms