RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 NHLRC2Q8NBF2 726 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 RCHY1Q96PM5 261 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 IGKV1D-17A0A075B6S4 117 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 A8MXE2 369 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 CD46P15529 392 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 RHOBP62745 196 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 PAFAH1B2P68402 229 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 DNAJC4Q9NNZ3 241 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 ASCL3Q9NQ33 180 aa14.8□□□□□ -0.04
TRAF4-201ENST00000262395 ADH4P08319 380 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 MLANAQ16655 118 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 TMEM183BQ1AE95 376 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 TMEM249Q2WGJ8 235 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 C11orf42Q8N5U0 333 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 LSM4Q9Y4Z0 139 aaKnown RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 V9GYV3 84 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 RP1L1Q8IWN7 2480 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 CA1P00915 261 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 NPY1RP25929 384 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 HOXC12P31275 282 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 COMPP49747 757 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 GMPPAQ96IJ6 420 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 SERTAD4Q9NUC0 356 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 CECR9P0C854 216 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 MGST1P10620 155 aaKnown RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 GNG4P50150 75 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 RANP62826 216 aaKnown RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 PRR7Q8TB68 274 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 IFI27L2Q9H2X8 130 aa14.79□□□□□ -0.04
TRAF4-201ENST00000262395 TBL2Q9Y4P3 447 aaKnown RBP14.79□□□□□ -0.04
TRAF4-201ENST00000262395 HELTA6NFD8 242 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 TNFSF15O95150 251 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 FAM19A2Q8N3H0 131 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 WDR31Q8NA23 367 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 SLC24A4Q8NFF2 622 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 ZPBPQ9BS86 351 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 OR7C2O60412 319 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 AMTP48728 403 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 TMEM164Q5U3C3 297 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 ATOH7Q8N100 152 aa14.78□□□□□ -0.04
TRAF4-201ENST00000262395 J3QW42 95 aa14.77□□□□□ -0.04
TRAF4-201ENST00000262395 CRYABP02511 175 aaKnown RBP14.77□□□□□ -0.04
TRAF4-201ENST00000262395 C20orf144Q9BQM9 153 aa14.77□□□□□ -0.04
TRAF4-201ENST00000262395 ARRDC1-AS1Q9H2J1 176 aa14.77□□□□□ -0.04
TRAF4-201ENST00000262395 ZNRD1Q9P1U0 126 aa14.77□□□□□ -0.04
TRAF4-201ENST00000262395 YLPM1P49750 1951 aaKnown RBP14.77□□□□□ -0.04
TRAF4-201ENST00000262395 INTS1Q8N201 2190 aaKnown RBP14.77□□□□□ -0.05
TRAF4-201ENST00000262395 DIRC3C9JPN6 131 aa14.77□□□□□ -0.05
TRAF4-201ENST00000262395 OR4A47Q6IF82 309 aa14.77□□□□□ -0.05
TRAF4-201ENST00000262395 INO80CQ6PI98 192 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-201ENST00000262395 DUX4L9Q6RFH8 374 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-201ENST00000262395 PCNX2A6NKB5 2137 aa14.77□□□□□ -0.05
TRAF4-201ENST00000262395 TRAV34A0A0B4J273 112 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 LOXL3P58215 753 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 MMDQ15546 238 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 PEAR1Q5VY43 1037 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-201ENST00000262395 TXNDC17Q9BRA2 123 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 WNT10AQ9GZT5 417 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 ENY2Q9NPA8 101 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 SUMO1P63165 101 aaKnown RBP14.76□□□□□ -0.05
TRAF4-201ENST00000262395 FAM214BQ7L5A3 538 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 FAM90A1Q86YD7 464 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 COL27A1Q8IZC6 1860 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-201ENST00000262395 TRGV10A0A0A0MS01 117 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 GPX1P07203 203 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 NTF3P20783 257 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 VHLLQ6RSH7 139 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 Q6ZT83 130 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 SSBP3Q9BWW4 388 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-201ENST00000262395 NRN1Q9NPD7 142 aa14.76□□□□□ -0.05
TRAF4-201ENST00000262395 TECTAO75443 2155 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 ZNF253O75346 499 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 MT-CO2P00403 227 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 SRIP30626 198 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 RAB7AP51149 207 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 TMPRSS3P57727 454 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 MSMPQ1L6U9 139 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 DHRS13Q6UX07 377 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 LYG1Q8N1E2 194 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 LINC00479Q96M42 142 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 NABP2Q9BQ15 211 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 C15orf61A6NNL5 157 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 LINC00869P0C866 280 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 MAP1BP46821 2468 aaKnown RBP14.75□□□□□ -0.05
TRAF4-201ENST00000262395 COTL1Q14019 142 aa14.75□□□□□ -0.05
TRAF4-201ENST00000262395 RNASE8Q8TDE3 154 aaKnown RBP14.75□□□□□ -0.05
TRAF4-201ENST00000262395 IGKV1OR2-108A0A075B7D4 117 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 SAA2-SAA4A0A096LPE2 208 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 SAA2P0DJI9 122 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-201ENST00000262395 RAB31Q13636 194 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 AARDQ4LEZ3 155 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 CT45A1Q5HYN5 189 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 OR52E5Q8NH55 327 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 CT45A3Q8NHU0 189 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 CHRNB4P30926 498 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 SPATA45Q537H7 98 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 MOGAT3Q86VF5 341 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 C1orf210Q8IVY1 113 aa14.74□□□□□ -0.05
TRAF4-201ENST00000262395 DEFB108BQ8NET1 73 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms