RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TP53TG5Q9Y2B4 290 aa8.35□□□□□ -1.07
COPB1-201ENST00000249923 SRRM5B3KS81 715 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 FCGR3BO75015 233 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 ZNF253O75346 499 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 IGHV3-48P01763 117 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 CDKN1AP38936 164 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 CAMPP49913 170 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 TPPP2P59282 170 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 MSMO1Q15800 293 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 TGIF2LYQ8IUE0 185 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 OR8I2Q8N0Y5 310 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 OR2Z1Q8NG97 314 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 R3HDM4Q96D70 268 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 ABCA4P78363 2273 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 TANC2Q9HCD6 1990 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 TMEM250H0YL14 139 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 SERF1AO75920 110 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 GCGP01275 180 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 MYOD1P15172 320 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 CD82P27701 267 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 OR10J1P30954 320 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 VDAC2P45880 294 aaPredicted RBP8.34□□□□□ -1.07
COPB1-201ENST00000249923 GNB1P62873 340 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 CATR1Q13166 79 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 WDR83OSQ9Y284 106 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 PIEZO2Q9H5I5 2752 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 ASH1LQ9NR48 2969 aaKnown RBP8.34□□□□□ -1.07
COPB1-201ENST00000249923 C20orf202A1L168 122 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 ZNF891A8MT65 544 aaPredicted RBP8.34□□□□□ -1.07
COPB1-201ENST00000249923 DIRC3C9JPN6 131 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 OR10J4P0C629 311 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 ADMP35318 185 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 SMIM21Q3B7S5 101 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 MIC13Q5XKP0 118 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 TREML4Q6UXN2 200 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 C1orf162Q8NEQ5 155 aaPredicted RBP8.34□□□□□ -1.07
COPB1-201ENST00000249923 DDB2Q92466 427 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 MGST2Q99735 147 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 SLC25A15Q9Y619 301 aa8.34□□□□□ -1.07
COPB1-201ENST00000249923 SPAARA0A1B0GVQ0 90 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 A8MXE2 369 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 GFRA3O60609 400 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 RELBQ01201 579 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 Q56UQ5 140 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 PIP4P1Q86T03 277 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 OR1L6Q8NGR2 347 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 HSD17B10Q99714 261 aaKnown RBP8.33□□□□□ -1.08
COPB1-201ENST00000249923 CTDSP1Q9GZU7 261 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 ZNF586Q9NXT0 402 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 POLR3KQ9Y2Y1 108 aaPredicted RBP8.33□□□□□ -1.08
COPB1-201ENST00000249923 PRR33A8MZF0 331 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 F2Z2F3 143 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 CGB3P0DN86 165 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 CGB7P0DN87 165 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 ATP6V1FQ16864 119 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 TMEM183BQ1AE95 376 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 DOLPP1Q86YN1 238 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 ABHD12Q8N2K0 398 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 BORCS7Q96B45 105 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 UHRF2Q96PU4 802 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 SSBP3Q9BWW4 388 aaPredicted RBP8.33□□□□□ -1.08
COPB1-201ENST00000249923 ZNRD1Q9P1U0 126 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 RBFOX2O43251 390 aaKnown RBP eCLIP8.33□□□□□ -1.08
COPB1-201ENST00000249923 CD1BP29016 333 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 C17orf58Q2M2W7 97 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 DEFB108BQ8NET1 73 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 OR10G8Q8NGN5 311 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 MS4A5Q9H3V2 200 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 ARL2-SNX15V9GYD0 113 aa8.33□□□□□ -1.08
COPB1-201ENST00000249923 SCO2A0A1W2PP80 73 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 CA1P00915 261 aaPredicted RBP8.32□□□□□ -1.08
COPB1-201ENST00000249923 FRMD6-AS1P0C7T7 363 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 ZNF474Q6S9Z5 364 aaPredicted RBP8.32□□□□□ -1.08
COPB1-201ENST00000249923 LINC01551Q86U37 167 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 SNRNP40Q96DI7 357 aaKnown RBP8.32□□□□□ -1.08
COPB1-201ENST00000249923 FAM122AQ96E09 287 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.32□□□□□ -1.08
COPB1-201ENST00000249923 AHRRA9YTQ3 701 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 LHBP01229 141 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 CHRNB4P30926 498 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 RAB7AP51149 207 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 OR4P4Q8NGL7 312 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 OR5R1Q8NH85 324 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 OR2V2Q96R30 315 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
COPB1-201ENST00000249923 ENY2Q9NPA8 101 aa8.32□□□□□ -1.08
COPB1-201ENST00000249923 C17orf112F2Z3M2 114 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 M0R1X1 148 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 MMP23AO75900 390 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 ARL14EPLP0DKL9 152 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 GATA2P23769 480 aaPredicted RBP8.31□□□□□ -1.08
COPB1-201ENST00000249923 GPR12P47775 334 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 ZNF718Q3SXZ3 478 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
COPB1-201ENST00000249923 SPATA31B1PQ5VZV4 182 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms