RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 LRRC75A-AS1Q8N1F1 130 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 TMEM217Q8N7C4 229 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 MARC2Q969Z3 335 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 MMP26Q9NRE1 261 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 BEX4Q9NWD9 120 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-215ENST00000641371 FBXO7Q9Y3I1 522 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 ZNF462Q96JM2 2506 aa7.88□□□□□ -1.15
PHGDH-215ENST00000641371 KRBOX1C9JBD0 128 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 NDUFS7O75251 213 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 FBXO24O75426 580 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 TOX4O94842 621 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 PRH1P02810 166 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 FAM157CP0CG43 387 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 NPY1RP25929 384 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 ATP6V0CP27449 155 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 REG1BP48304 166 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 DVL1P1P54792 670 aaPredicted RBP7.87□□□□□ -1.15
PHGDH-215ENST00000641371 PAX2Q02962 417 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 TMEM267Q0VDI3 215 aaPredicted RBP7.87□□□□□ -1.15
PHGDH-215ENST00000641371 RAB31Q13636 194 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 LRRC75BQ2VPJ9 315 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 UTF1Q5T230 341 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 VMO1Q7Z5L0 202 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 CENPVQ7Z7K6 275 aaPredicted RBP7.87□□□□□ -1.15
PHGDH-215ENST00000641371 MOB3BQ86TA1 216 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 ZNF709Q8N972 641 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 HSD17B11Q8NBQ5 300 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 SLC24A4Q8NFF2 622 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 OR2G3Q8NGZ4 309 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 MALSU1Q96EH3 234 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 WDR61Q9GZS3 305 aaKnown RBP7.87□□□□□ -1.15
PHGDH-215ENST00000641371 SIRPDQ9H106 197 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 NARFLQ9H6Q4 476 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 WFDC1Q9HC57 220 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 KIAA1456Q9P272 454 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 HELZ2Q9BYK8 2649 aaKnown RBP7.87□□□□□ -1.15
PHGDH-215ENST00000641371 RELNP78509 3460 aa7.87□□□□□ -1.15
PHGDH-215ENST00000641371 SPTAN1Q13813 2472 aaKnown RBP7.86□□□□□ -1.15
PHGDH-215ENST00000641371 MFSD2BA6NFX1 497 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 C15orf62A8K5M9 175 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 PMS2P5A8MQ11 134 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 J3QKU1 62 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 RNF224P0DH78 156 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 SNCAP37840 140 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 CAMLGP49069 296 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 C2orf83Q53S99 150 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 FAM74A1Q5RGS3 127 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 OR8G2PQ6IF36 304 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 ETV3LQ6ZN32 361 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 VKORC1L1Q8N0U8 176 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 LYPD6BQ8NI32 183 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 TAF15Q92804 592 aaKnown RBP eCLIP7.86□□□□□ -1.15
PHGDH-215ENST00000641371 ZDHHC16Q969W1 377 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 OR4C12Q96R67 309 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 SMDT1Q9H4I9 107 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 NDUFA4L2Q9NRX3 87 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 C1RLQ9NZP8 487 aa7.86□□□□□ -1.15
PHGDH-215ENST00000641371 USP9XQ93008 2570 aaPredicted RBP7.86□□□□□ -1.15
PHGDH-215ENST00000641371 HRNRQ86YZ3 2850 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 SMG1Q96Q15 3661 aaKnown RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 TEX50A0A1B0GTY4 177 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 A0A1W2PPI3 338 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 SRRM4A7MD48 611 aaKnown RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 CORTO00230 105 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 MOSP00540 346 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 IGLV2-23P01705 113 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 IFNA4P05014 189 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 HOXB4P17483 251 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 BRS3P32247 399 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 LCN2P80188 198 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 SRSF1Q07955 248 aaKnown RBP eCLIP7.85□□□□□ -1.152e-10■■■□□ 18.2
PHGDH-215ENST00000641371 PJVKQ0ZLH3 352 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 AANATQ16613 207 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 PXDC1Q5TGL8 231 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 THNSL2Q86YJ6 484 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 OR1L6Q8NGR2 347 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 OR2T10Q8NGZ9 312 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 RNASEH2CQ8TDP1 164 aaKnown RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 CACNG8Q8WXS5 425 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 BSCL2Q96G97 398 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 PBDC1Q9BVG4 233 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 SIRT7Q9NRC8 400 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 ZNRD1Q9P1U0 126 aa7.85□□□□□ -1.15
PHGDH-215ENST00000641371 TET2Q6N021 2002 aaPredicted RBP7.85□□□□□ -1.15
PHGDH-215ENST00000641371 UBR5O95071 2799 aaPredicted RBP7.84□□□□□ -1.15
PHGDH-215ENST00000641371 TRAV3A0A0B4J244 114 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 TRAV20A0A0B4J274 112 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 UBE2L5PA0A1B0GUS4 154 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 ANKRD34BA5PLL1 514 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 B4DSR2 109 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 CYB5BO43169 146 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 SLC25A17O43808 307 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 VENTXO95231 258 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 TSPAN15O95858 294 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 CRYGBP07316 175 aa7.84□□□□□ -1.15
PHGDH-215ENST00000641371 SNRNP70P08621 437 aaKnown RBP7.84□□□□□ -1.15
PHGDH-215ENST00000641371 ZFP36P26651 326 aaKnown RBP7.84□□□□□ -1.15
PHGDH-215ENST00000641371 GPX4P36969 197 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms