RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SOX21Q9Y651 276 aaPredicted RBP2.22□□□□□ -2.05
PSPC1-208ENST00000635562 ENPP4Q9Y6X5 453 aa2.22□□□□□ -2.05
PSPC1-208ENST00000635562 RALGAPA2Q2PPJ7 1873 aa2.22□□□□□ -2.05
PSPC1-208ENST00000635562 CROCCQ5TZA2 2017 aa2.22□□□□□ -2.05
PSPC1-208ENST00000635562 PPLO60437 1756 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 IGHV3OR16-13A0A075B7E8 117 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 LOC389332A0A1B0GUA5 103 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 IZUMO1RA6ND01 250 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 GGT3PA6NGU5 568 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 GGTLC3B5MD39 225 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ZNF670-ZNF695F2Z2N8 137 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 RPL36A-HNRNPH2H7BZ11 118 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 K7EQD1 137 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 AGPAT2O15120 278 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 NXPH4O95158 308 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 FKBP2P26885 142 aaKnown RBP2.21□□□□□ -2.06
PSPC1-208ENST00000635562 OR10J1P30954 320 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 OPRM1P35372 400 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 DEFA3P59666 94 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 S100A10P60903 97 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ERVK-16P61578 105 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 GRB2P62993 217 aaKnown RBP2.21□□□□□ -2.06
PSPC1-208ENST00000635562 BTG2P78543 158 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 CST6Q15828 149 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 CCL14Q16627 93 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 CLLU1OSQ5K130 101 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 MUC21Q5SSG8 566 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 Q6Q795 121 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 TMEM14EPQ6UXP3 125 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 UNQ9165/PRO28630Q6UXU0 137 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ACP7Q6ZNF0 438 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 DNM1P46Q6ZS02 220 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ATP5L2Q7Z4Y8 100 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 OR4S1Q8NGB4 309 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 OR2T27Q8NH04 317 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 PPTC7Q8NI37 304 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 FLVCR1-AS1Q8TAF5 88 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 SLC25A40Q8TBP6 338 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 RXFP4Q8TDU9 374 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ARAP2Q8WZ64 1704 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 NUP205Q92621 2012 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 NEURL3Q96EH8 262 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 TEX37Q96LM6 180 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 NMNAT3Q96T66 252 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 SCN2AQ99250 2005 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 SDF2Q99470 211 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 SOSTQ9BQB4 213 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 SLC25A21Q9BQT8 299 aaPredicted RBP2.21□□□□□ -2.06
PSPC1-208ENST00000635562 C1QTNF6Q9BXI9 259 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 CLEC7AQ9BXN2 247 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 COMMD5Q9GZQ3 224 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 EIF5A2Q9GZV4 153 aaKnown RBP2.21□□□□□ -2.06
PSPC1-208ENST00000635562 TMEM191AQ9H0A3 160 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 DEFB127Q9H1M4 99 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 MED28Q9H204 178 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 PRO1933Q9H354 126 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 RPRMQ9NS64 109 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 CLCF1Q9UBD9 225 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ZNF629Q9UEG4 869 aaPredicted RBP2.21□□□□□ -2.06
PSPC1-208ENST00000635562 RARRES3Q9UL19 164 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 CYSLTR1Q9Y271 337 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 IER3IP1Q9Y5U9 82 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ABCC3O15438 1527 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 WDR62O43379 1518 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 LMTK2Q8IWU2 1503 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 ALPK3Q96L96 1907 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 LTN1O94822 1766 aa2.21□□□□□ -2.06
PSPC1-208ENST00000635562 MAGI2Q86UL8 1455 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 KNDC1Q76NI1 1749 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 DOCK4Q8N1I0 1966 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 DAPK1P53355 1430 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 KIF13AQ9H1H9 1805 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 IGHV6-1A0A0B4J1U7 121 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 IGHV3-38A0A0C4DH36 116 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 IGKV1-8A0A0C4DH67 115 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 IGHV1-69-2A0A0G2JMI3 117 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 A0A0G2JMM0 328 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 A0A1W2PPB8 328 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 MEIS3P1A6NDR6 274 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 KIR3DP1A8MWS1 328 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 CLDN25C9JDP6 229 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 GABARAPH6UMI1 98 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 J3QRK9 145 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 K7EQG2 157 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 SRSF10O75494 262 aaKnown RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 SNAPC5O75971 98 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 APOMO95445 188 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 FSTL3O95633 263 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 MT-ND4LP03901 98 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 SMIM10L2AP0DMW4 78 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 SMIM10L2BP0DMW5 78 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 CTSEP14091 401 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 PGAM2P15259 253 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 IGLL1P15814 213 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 ZNF19P17023 458 aa2.2□□□□□ -2.06
PSPC1-208ENST00000635562 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 VDAC2P45880 294 aaPredicted RBP2.2□□□□□ -2.06
PSPC1-208ENST00000635562 NCBP2P52298 156 aaKnown RBP eCLIP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms