RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 EFEMP2O95967 443 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 CITED2Q99967 270 aaPredicted RBP7.6□□□□□ -1.19
GABRB3-216ENST00000628124 PRSS22Q9GZN4 317 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 IZUMO1RA6ND01 250 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 M0R2P5 195 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 HBDP02042 147 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 TIMM23BQ5SRD1 257 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 ZNF501Q96CX3 271 aaPredicted RBP7.6□□□□□ -1.19
GABRB3-216ENST00000628124 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 PRADC1Q9BSG0 188 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 OTORQ9NRC9 128 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 SPANXA1Q9NS26 97 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 SEC11AP67812 179 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 PEAR1Q5VY43 1037 aaPredicted RBP7.6□□□□□ -1.19
GABRB3-216ENST00000628124 SIGMAR1Q99720 223 aa7.6□□□□□ -1.19
GABRB3-216ENST00000628124 A0A087WX48 190 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 ITGBL1O95965 494 aaPredicted RBP7.59□□□□□ -1.19
GABRB3-216ENST00000628124 CD28P10747 220 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 IL11P20809 199 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 NRN1LQ496H8 165 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 DRAM1Q8N682 238 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 Q96M66 194 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 CD7P09564 240 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 GLRXP35754 106 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 LINC00158P58513 81 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 NANOS3P60323 173 aaKnown RBP7.59□□□□□ -1.19
GABRB3-216ENST00000628124 ZNF79Q15937 498 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 ZIC4Q8N9L1 334 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 FAM168AQ92567 244 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 FOXA2Q9Y261 457 aaPredicted RBP7.59□□□□□ -1.19
GABRB3-216ENST00000628124 TGFAP01135 160 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 GAGE2BQ13066 116 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 GAGE2EQ4V326 116 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 GAGE2DQ9UEU5 116 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 LAMTOR3Q9UHA4 124 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 SMPXQ9UHP9 88 aa7.59□□□□□ -1.19
GABRB3-216ENST00000628124 IGHV3-35A0A0C4DH35 117 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 MPTX1A8MV57 137 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 H3BUT2 72 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 FOXS1O43638 330 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 VDAC2P45880 294 aaPredicted RBP7.59□□□□□ -1.2
GABRB3-216ENST00000628124 TMEM187Q14656 261 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 PVRIGQ6DKI7 326 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 ZAR1Q86SH2 424 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 SLC25A38Q96DW6 304 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 C14orf144Q96I85 54 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 PPP1R3EQ9H7J1 279 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 SEPSECSQ9HD40 501 aaKnown RBP7.59□□□□□ -1.2
GABRB3-216ENST00000628124 ERG28Q9UKR5 140 aa7.59□□□□□ -1.2
GABRB3-216ENST00000628124 ASXL3Q9C0F0 2248 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 HRKO00198 91 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 VKORC1Q9BQB6 163 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 ZNF600Q6ZNG1 722 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 C8orf46Q8TAG6 207 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 ORAOV1Q8WV07 137 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 WNT10AQ9GZT5 417 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 NHP2Q9NX24 153 aaKnown RBP7.58□□□□□ -1.2
GABRB3-216ENST00000628124 IFT172Q9UG01 1749 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 ANAPC10Q9UM13 185 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 YBX2Q9Y2T7 364 aaKnown RBP7.58□□□□□ -1.2
GABRB3-216ENST00000628124 TIAM2Q8IVF5 1701 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 TRAV2A0A0B4J234 112 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 FAM90A1Q86YD7 464 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
GABRB3-216ENST00000628124 PQLC2LA1A4F0 135 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 ZIC3O60481 467 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 CD5P06127 495 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 KLHDC2Q9Y2U9 406 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 HS3ST3B1Q9Y662 390 aa7.58□□□□□ -1.2
GABRB3-216ENST00000628124 ICE1Q9Y2F5 2266 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 ZNHIT1O43257 154 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 LILRA1O75019 489 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 IGKV1D-33P01593 117 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 IGKV1-33P01594 117 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
GABRB3-216ENST00000628124 HIST1H4AP62805 103 aaKnown RBP7.57□□□□□ -1.2
GABRB3-216ENST00000628124 SRSF4Q08170 494 aaKnown RBP7.57□□□□□ -1.2
GABRB3-216ENST00000628124 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 MYH4Q9Y623 1939 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 CHD4Q14839 1912 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 GFRA3O60609 400 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 NTN1O95631 604 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 ERVK11-1P61568 191 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 PCOLCEQ15113 449 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 DMRTA1Q5VZB9 504 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 CLEC19AQ6UXS0 136 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 FBXL15Q9H469 300 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 IGHV3OR16-10A0A075B7F0 116 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 C7orf69Q9H7B7 122 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
GABRB3-216ENST00000628124 APC2O95996 2303 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 CHD2O14647 1828 aaKnown RBP7.57□□□□□ -1.2
GABRB3-216ENST00000628124 TRBV5-7A0A0A0MS05 114 aa7.57□□□□□ -1.2
GABRB3-216ENST00000628124 PRR19A6NJB7 356 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms