RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 C1orf174Q8IYL3 243 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 OR8B12Q8NGG6 310 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 OR51H1Q8NH63 302 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 OR10A6Q8NH74 314 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 BORCS5Q969J3 196 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 MAL2Q969L2 176 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 GALMQ96C23 342 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 ABHD14BQ96IU4 210 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 AIF1LQ9BQI0 150 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 TMEM147Q9BVK8 224 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 MED28Q9H204 178 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 RSL24D1Q9UHA3 163 aaKnown RBP1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 DNAJC12Q9UKB3 198 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 PYCARDQ9ULZ3 195 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 COQ4Q9Y3A0 265 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 TMEM56-RWDD3S4R434 201 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 ICE1Q9Y2F5 2266 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 RALGAPA2Q2PPJ7 1873 aa1.63□□□□□ -2.15
SCAMP1-205ENST00000614488 ARHGEF10O15013 1369 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 HMGXB3Q12766 1538 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 KIF1BO60333 1816 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 VIRMAQ69YN4 1812 aaKnown RBP1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 A0A1B0GV50 99 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 CRYZL1O95825 349 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 MT-CO2P00403 227 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 HLA-DRB1P01911 266 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 PRB1P04280 392 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 HLA-DQB2P05538 268 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 S100A7P31151 101 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 GABRA3P34903 492 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 PPP1CCP36873 323 aaKnown RBP1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 GABRA4P48169 554 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 DEFB103AP81534 67 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 FABP9Q0Z7S8 132 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 PDGFRLQ15198 375 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 CCDC153Q494R4 210 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 DCUN1D2Q6PH85 259 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 OOSP2Q86WS3 158 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 UMODL1-AS1Q8N2C9 162 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 KRTCAP2Q8N6L1 136 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 PACRGLQ8N7B6 248 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 BPIFB6Q8NFQ5 453 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 OR11H6Q8NGC7 330 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 OR8S1Q8NH09 359 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 OR4A5Q8NH83 315 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 RMND5BQ96G75 393 aaPredicted RBP1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 CNBD2Q96M20 576 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 TMEM222Q9H0R3 208 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 GSKIPQ9P0R6 139 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 PRNDQ9UKY0 176 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 ZNF443Q9Y2A4 671 aaPredicted RBP1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 NOS1P29475 1434 aa1.62□□□□□ -2.15
SCAMP1-205ENST00000614488 THSD7AQ9UPZ6 1657 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ZNF106Q9H2Y7 1883 aaKnown RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 MIA2Q96PC5 1412 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 hCG_1818297A0A087WSY0 165 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 IGSF23A1L1A6 192 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 TRAPPC13A5PLN9 417 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 MAP1LC3B2A6NCE7 125 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 OR4C45A6NMZ5 311 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 A8MT66 165 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 G3V2T6 193 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 POP7O75817 140 aaKnown RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 APOMO95445 188 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 LTAP01374 205 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 C1QBP02746 253 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 OPN1SWP03999 348 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 SERPINE1P05121 402 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 SCGB1A1P11684 91 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 CDK2P24941 298 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ERP29P30040 261 aaKnown RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 OR10J1P30954 320 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 PHBP35232 272 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 CA7P43166 264 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 NCALDP61601 193 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 BSPH1Q075Z2 132 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 SURF2Q15527 256 aaPredicted RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 TMEM128Q5BJH2 165 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 AKR1C8PQ5T2L2 129 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 C5orf46Q6UWT4 87 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 LYPD6Q86Y78 171 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 FAM24BQ8N5W8 94 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ZNF439Q8NDP4 499 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 GNPDA2Q8TDQ7 276 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 LMX1AQ8TE12 382 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 CT55Q8WUE5 264 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 LZICQ8WZA0 190 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ERMAPQ96PL5 475 aaPredicted RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 TRIB3Q96RU7 358 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 GPER1Q99527 375 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 MAP1LC3BQ9GZQ8 125 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ALX4Q9H161 411 aaPredicted RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 KCNIP2Q9NS61 270 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 SLC23A2Q9UGH3 650 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 MRPS16Q9Y3D3 137 aaKnown RBP1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 FIS1Q9Y3D6 152 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 HSPB11Q9Y547 144 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 OR51B4Q9Y5P0 310 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ATG2BQ96BY7 2078 aa1.61□□□□□ -2.15
SCAMP1-205ENST00000614488 ATAD5Q96QE3 1844 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms