RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 KLK9Q2XQG4 91 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 CNPY1Q3B7I2 92 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 SPANXN2Q5MJ10 180 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 SAMD5Q5TGI4 173 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 C19orf35Q6ZS72 473 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 TMEM230Q96A57 120 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 PRRT1Q99946 306 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 KLK9Q9UKQ9 250 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 VSIG4Q9Y279 399 aa15.11■□□□□ 0.01
SHKBP1-221ENST00000599833 HMX3A6NHT5 357 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 DBX1A6NMT0 343 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 MYCNOSP40205 109 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 ECI1P42126 302 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 RPL27AP46776 148 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 OR2B8PP59922 312 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 TTC9CQ8N5M4 171 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 GDPD1Q8N9F7 314 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 ZFAND1Q8TCF1 268 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 MS4A10Q96PG2 267 aa15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 ALX4Q9H161 411 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-221ENST00000599833 G3V4G9 280 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 KRASP01116 189 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 IGKV1-5P01602 117 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 DEFA5Q01523 94 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 TMEM65Q6PI78 240 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 AIFM2Q9BRQ8 373 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 AKIP1Q9NQ31 210 aa15.09■□□□□ 0.01
SHKBP1-221ENST00000599833 TRBV9A0A0B4J1U6 114 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 NUDT19A8MXV4 375 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 CCL24O00175 119 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 CRYGCP07315 174 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 AREGP15514 252 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 UCP1P25874 307 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 SP6Q3SY56 376 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 TOMM5Q8N4H5 51 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 DMBX1Q8NFW5 382 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 LHFPL5Q8TAF8 219 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 DEDD2Q8WXF8 326 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 SPIN2AQ99865 258 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 SPIN2BQ9BPZ2 258 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 SLA2Q9H6Q3 261 aa15.08■□□□□ 0
SHKBP1-221ENST00000599833 C3orf85A0A1B0GTC6 90 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 IGLC7A0M8Q6 106 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 CRYM-AS1A6NIL9 109 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 NPIPB5A8MRT5 1133 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 LGALS1P09382 135 aaKnown RBP15.07■□□□□ 0
SHKBP1-221ENST00000599833 S100GP29377 79 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 TPPP2P59282 170 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 KPRPQ5T749 579 aaPredicted RBP15.07■□□□□ 0
SHKBP1-221ENST00000599833 PHB2Q99623 299 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 TMEM14BQ9NUH8 114 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 NSG2Q9Y328 171 aa15.07■□□□□ 0
SHKBP1-221ENST00000599833 A0A0G2JRQ6 117 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 TEX50A0A1B0GTY4 177 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 ACTL6BO94805 426 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 PF4P02776 101 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 PRH1P02810 166 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 TRGV3P03979 118 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 CTRB1P17538 263 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 SUPT4H1P63272 117 aaKnown RBP15.06■□□□□ 0
SHKBP1-221ENST00000599833 IZUMO4Q1ZYL8 232 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 BEAN1Q3B7T3 259 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 CTRB2Q6GPI1 263 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 CCDC71LQ8N9Z2 235 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 GLYATL2Q8WU03 294 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 FANCD2OSQ96PS1 177 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 OR5B12Q96R08 314 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 NAA60Q9H7X0 242 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 NDUFA4L2Q9NRX3 87 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 MCUBQ9NWR8 336 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 COPZ2Q9P299 210 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 SCP2D1Q9UJQ7 156 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 DMRT1Q9Y5R6 373 aa15.06■□□□□ 0
SHKBP1-221ENST00000599833 IGHV3-11P01762 117 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 BTCP35070 178 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 AP3S2P59780 193 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 OXLD1Q5BKU9 147 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 LINC00299Q6ZSB3 139 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 OR11H1Q8NG94 326 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 FYTTD1Q96QD9 318 aaKnown RBP15.05■□□□□ -0
SHKBP1-221ENST00000599833 TMEM222Q9H0R3 208 aa15.05■□□□□ -0
SHKBP1-221ENST00000599833 IGHV4OR15-8A0A075B7B6 117 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 A0A087WW49 117 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 TEX13DA0A0J9YY54 714 aaPredicted RBP15.04■□□□□ -0
SHKBP1-221ENST00000599833 C15orf61A6NNL5 157 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 CDS2O95674 445 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 OR5AC1P0C628 307 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 IL7P13232 177 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 IGLL1P15814 213 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 PSMB6P28072 239 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 ERVK-16P61578 105 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 WT1-ASQ06250 92 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 C1QL4Q86Z23 238 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 OR10W1Q8NGF6 305 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 COA4Q9NYJ1 87 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 C14orf166Q9Y224 244 aaKnown RBP15.04■□□□□ -0
SHKBP1-221ENST00000599833 ZNF257Q9Y2Q1 563 aa15.04■□□□□ -0
SHKBP1-221ENST00000599833 A0A0B4J293 547 aa15.03■□□□□ -0
SHKBP1-221ENST00000599833 B3GALNT1O75752 331 aa15.03■□□□□ -0
SHKBP1-221ENST00000599833 SERPINE2P07093 398 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms