RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 POU2AF1Q16633 256 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 RPEL1Q2QD12 228 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 LPCAT3Q6P1A2 487 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 OR52I2Q8NH67 350 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 RAB2BQ8WUD1 216 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 B9D2Q9BPU9 175 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 COMMD5Q9GZQ3 224 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 KLK11Q9UBX7 282 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 DHFRP00374 187 aa17.31■□□□□ 0.36
CCDC9-204ENST00000599398 IFNA6P05013 189 aa17.31■□□□□ 0.36
CCDC9-204ENST00000599398 REG1AP05451 166 aa17.31■□□□□ 0.36
CCDC9-204ENST00000599398 SPNP16150 400 aa17.31■□□□□ 0.36
CCDC9-204ENST00000599398 TATDN3Q17R31 274 aa17.31■□□□□ 0.36
CCDC9-204ENST00000599398 C15orf32Q32M92 178 aa17.31■□□□□ 0.36
CCDC9-204ENST00000599398 LSM4Q9Y4Z0 139 aaKnown RBP17.31■□□□□ 0.36
CCDC9-204ENST00000599398 MARCH11A6NNE9 402 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 DEFA4P12838 97 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 PSMB6P28072 239 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 OR2B8PP59922 312 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 VAX1Q5SQQ9 334 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 HAPLN4Q86UW8 402 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 OR9G4Q8NGQ1 327 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 C15orf40Q8WUR7 153 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 FCAMRQ8WWV6 532 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 ABHD1Q96SE0 405 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 FBXL7Q9UJT9 491 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 COL7A1Q02388 2944 aa17.3■□□□□ 0.36
CCDC9-204ENST00000599398 CGB1A6NKQ9 187 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 CTDSP2O14595 271 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 NOL3O60936 208 aaKnown RBP17.29■□□□□ 0.36
CCDC9-204ENST00000599398 KRASP01116 189 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 CRYGCP07315 174 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 TMBIM6P55061 237 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 RNASE10Q5GAN6 216 aaKnown RBP17.29■□□□□ 0.36
CCDC9-204ENST00000599398 LAX1Q8IWV1 398 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 SLC38A6Q8IZM9 456 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 MIXL1Q9H2W2 232 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 MTFP1Q9UDX5 166 aa17.29■□□□□ 0.36
CCDC9-204ENST00000599398 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.28■□□□□ 0.36
CCDC9-204ENST00000599398 TPPPO94811 219 aa17.28■□□□□ 0.36
CCDC9-204ENST00000599398 CTRB1P17538 263 aa17.28■□□□□ 0.36
CCDC9-204ENST00000599398 G6PCP35575 357 aa17.28■□□□□ 0.36
CCDC9-204ENST00000599398 RPL5P46777 297 aaKnown RBP17.28■□□□□ 0.36
CCDC9-204ENST00000599398 CTRB2Q6GPI1 263 aa17.28■□□□□ 0.36
CCDC9-204ENST00000599398 TBC1D26Q86UD7 250 aa17.28■□□□□ 0.36
CCDC9-204ENST00000599398 BMPR1BO00238 502 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 CD3DP04234 171 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 GP9P14770 177 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 PGAM2P15259 253 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 UCP3P55916 312 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 ZNF585BQ52M93 769 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 C11orf87Q6NUJ2 197 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 FANCD2OSQ96PS1 177 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 BCL7BQ9BQE9 202 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 QTRT1Q9BXR0 403 aaKnown RBP17.27■□□□□ 0.36
CCDC9-204ENST00000599398 S4R3C0 116 aa17.27■□□□□ 0.36
CCDC9-204ENST00000599398 SNAPC5O75971 98 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 NDUFB8O95169 186 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 IGHV3-23P01764 117 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 HIST1H1BP16401 226 aaKnown RBP17.26■□□□□ 0.35
CCDC9-204ENST00000599398 FAM209BQ5JX69 171 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 DYNC2LI1Q8TCX1 351 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 HINT2Q9BX68 163 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 CCDC59Q9P031 241 aaKnown RBP17.26■□□□□ 0.35
CCDC9-204ENST00000599398 NSG2Q9Y328 171 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 SMAD5-AS1Q9Y6J3 95 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 DNAH9Q9NYC9 4486 aa17.26■□□□□ 0.35
CCDC9-204ENST00000599398 IGLC7A0M8Q6 106 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 PPP5D1E7EU14 171 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 IGLV1-51P01701 117 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 FGF2P09038 288 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 TBPP20226 339 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 ARRDC1Q8N5I2 433 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 OR10W1Q8NGF6 305 aa17.25■□□□□ 0.35
CCDC9-204ENST00000599398 SRSF8Q9BRL6 282 aaKnown RBP17.25■□□□□ 0.35
CCDC9-204ENST00000599398 TEX50A0A1B0GTY4 177 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 GABARAPH6UMI1 98 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 TRAPPC2P0DI81 140 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 TRAPPC2BP0DI82 140 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 TAS2R19P59542 299 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 IL34Q6ZMJ4 242 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 TMEM229BQ8NBD8 167 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 OR1L8Q8NGR8 309 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 EEF1AKMT3Q96AZ1 226 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 DIRAS2Q96HU8 199 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 C6orf62Q9GZU0 229 aaPredicted RBP17.24■□□□□ 0.35
CCDC9-204ENST00000599398 PEMTQ9UBM1 199 aa17.24■□□□□ 0.35
CCDC9-204ENST00000599398 IGLV11-55A0A075B6I3 123 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 HLA-AP01891 365 aaKnown RBP17.23■□□□□ 0.35
CCDC9-204ENST00000599398 PI3P19957 117 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 PPP5CP53041 499 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 IL18Q14116 193 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 THOC7Q6I9Y2 204 aaKnown RBP17.23■□□□□ 0.35
CCDC9-204ENST00000599398 CLEC19AQ6UXS0 136 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 OR4D10Q8NGI6 311 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 FAM212BQ9NTI7 297 aaPredicted RBP17.23■□□□□ 0.35
CCDC9-204ENST00000599398 OR51B2Q9Y5P1 312 aa17.23■□□□□ 0.35
CCDC9-204ENST00000599398 H3BMQ9 156 aa17.22■□□□□ 0.35
CCDC9-204ENST00000599398 GGCTO75223 188 aaKnown RBP17.22■□□□□ 0.35
CCDC9-204ENST00000599398 RAB3DO95716 219 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms