RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 OR4A16Q8NH70 328 aa17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 SGMS2Q8NHU3 365 aa17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 WFDC12Q8WWY7 111 aa17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 SRSF12Q8WXF0 261 aaKnown RBP17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 IL22RA2Q969J5 263 aa17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 COMMD5Q9GZQ3 224 aa17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 ALX4Q9H161 411 aaPredicted RBP17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 PALMDQ9NP74 551 aa17.4■□□□□ 0.38
CHMP2A-204ENST00000597848 COL6A5A8TX70 2615 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 RBMXL2O75526 392 aaKnown RBP17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 MYOD1P15172 320 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 RPL27AP46776 148 aaKnown RBP17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 DCTN2Q13561 401 aaKnown RBP17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 IZUMO4Q1ZYL8 232 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 ANKRD55Q3KP44 614 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 PLET1Q6UQ28 207 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 LYG2Q86SG7 212 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 DUSP18Q8NEJ0 188 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 FYTTD1Q96QD9 318 aaKnown RBP17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 PRNDQ9UKY0 176 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 PLXNB1O43157 2135 aa17.39■□□□□ 0.37
CHMP2A-204ENST00000597848 OR2B8PP59922 312 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 DHRS2Q13268 280 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 C10orf99Q6UWK7 81 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 SLC35G3Q8N808 338 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 C11orf44Q8N8P7 122 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 SPIN2AQ99865 258 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 SPIN2BQ9BPZ2 258 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 ZNF580Q9UK33 172 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 OR51B2Q9Y5P1 312 aa17.38■□□□□ 0.37
CHMP2A-204ENST00000597848 PIGBOS1A0A0B4J2F0 54 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 APELAP0DMC3 54 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 KRTAP10-3P60369 221 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 SRSF4Q08170 494 aaKnown RBP17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 LYZL2Q7Z4W2 148 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 FAM219AQ8IW50 185 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 ZNF747Q9BV97 191 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 FKBP11Q9NYL4 201 aa17.37■□□□□ 0.37
CHMP2A-204ENST00000597848 A0A0B4J2A0 478 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 A0A0G2JRQ6 117 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 P0C879 139 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 CRIP2P52943 208 aaPredicted RBP17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 AKIRIN2Q53H80 203 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 OR4X2Q8NGF9 303 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 OR52B4Q8NGK2 314 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 COQ8AQ8NI60 647 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 LSM10Q969L4 123 aaKnown RBP17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 HINT2Q9BX68 163 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 SHPKQ9UHJ6 478 aa17.36■□□□□ 0.37
CHMP2A-204ENST00000597848 TEX50A0A1B0GTY4 177 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 A0A1W2PN81 502 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 HMX3A6NHT5 357 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 C15orf61A6NNL5 157 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 FBXO24O75426 580 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 DUS4LO95620 317 aaKnown RBP17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 FGF2P09038 288 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 CD28P10747 220 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 CHRNA7P36544 502 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 TEX38Q6PEX7 206 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 LRTM2Q8N967 370 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 OR5T1Q8NG75 326 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 OR1L8Q8NGR8 309 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 WIPF2Q8TF74 440 aaPredicted RBP17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 TMEM68Q96MH6 324 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 SEC22CQ9BRL7 303 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 FOXA2Q9Y261 457 aaPredicted RBP17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 TNCP24821 2201 aa17.35■□□□□ 0.37
CHMP2A-204ENST00000597848 A0A0B4J293 547 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 E7EUB6 86 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 INMT-MINDY4F8WBC2 141 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 SPNP16150 400 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 MECP2P51608 486 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 CFHR3Q02985 330 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 COMMD1Q8N668 190 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 MINDY2Q8NBR6 621 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 QTRT1Q9BXR0 403 aaKnown RBP17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 TMEM14BQ9NUH8 114 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 CACNG5Q9UF02 275 aa17.34■□□□□ 0.37
CHMP2A-204ENST00000597848 DUXBA0A1W2PPF3 345 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 DBX1A6NMT0 343 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 PTTG1O95997 202 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 HOXB5P09067 269 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 TRAPPC2P0DI81 140 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 TRAPPC2BP0DI82 140 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 PPIFP30405 207 aaKnown RBP17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 C19orf54Q5BKX5 351 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 ASPHD1Q5U4P2 390 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 HIST2H2BDQ6DRA6 164 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 Q6ZRM9 215 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 OR5B3Q8NH48 314 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 PDCD10Q9BUL8 212 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 ZNF355PQ9NSJ1 428 aa17.33■□□□□ 0.36
CHMP2A-204ENST00000597848 A0A1B0GW64 132 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 TEX22C9J3V5 150 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 IGHG4P01861 327 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 PF4V1P10720 104 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 HSPE1P61604 102 aaKnown RBP17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 TMEM65Q6PI78 240 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms