RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TEX45Q8NA69 505 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 WFDC11Q8NEX6 87 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 CIB3Q96Q77 187 aaPredicted RBP16.68■□□□□ 0.26
PNKP-203ENST00000593946 FKBP11Q9NYL4 201 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 OR51B2Q9Y5P1 312 aa16.68■□□□□ 0.26
PNKP-203ENST00000593946 TGFAP01135 160 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 AVPP01185 164 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 IGKV1D-33P01593 117 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 IGKV1-33P01594 117 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 CRYGBP07316 175 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 RPL8P62917 257 aaKnown RBP16.67■□□□□ 0.26
PNKP-203ENST00000593946 NHLH2Q02577 135 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 PSG5Q15238 335 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 RUSC1-AS1Q66K80 236 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 TPSG1Q9NRR2 321 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 TEX15Q9BXT5 2789 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 SPDEFO95238 335 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 MOSP00540 346 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 IGHV4-38-2P0DP08 117 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 MYOD1P15172 320 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 EBI3Q14213 229 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 MRGPRG-AS1Q2M3A8 158 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 CLEC9AQ6UXN8 241 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 OR5B3Q8NH48 314 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 BSCL2Q96G97 398 aaPredicted RBP16.67■□□□□ 0.26
PNKP-203ENST00000593946 ZNF430Q9H8G1 570 aaPredicted RBP16.67■□□□□ 0.26
PNKP-203ENST00000593946 CYTL1Q9NRR1 136 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 FBXL17Q9UF56 701 aa16.67■□□□□ 0.26
PNKP-203ENST00000593946 IGHV3OR16-10A0A075B7F0 116 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 TAAR5O14804 337 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 LY86O95711 162 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 SNRNP70P08621 437 aaKnown RBP16.66■□□□□ 0.26
PNKP-203ENST00000593946 BAXQ07812 192 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 TEX261Q6UWH6 196 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 EAF1Q96JC9 268 aaPredicted RBP16.66■□□□□ 0.26
PNKP-203ENST00000593946 SIGLEC9Q9Y336 463 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 U3KQ87 197 aa16.66■□□□□ 0.26
PNKP-203ENST00000593946 FLNAP21333 2647 aaKnown RBP16.66■□□□□ 0.26
PNKP-203ENST00000593946 CD24P25063 80 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 VDAC2P45880 294 aaPredicted RBP16.65■□□□□ 0.26
PNKP-203ENST00000593946 FBLN7Q53RD9 439 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 KLF17Q5JT82 389 aaPredicted RBP16.65■□□□□ 0.26
PNKP-203ENST00000593946 BRD3OSQ6XYD6 125 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 OR8H1Q8NGG4 311 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 OR2T10Q8NGZ9 312 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 ZNF471Q9BX82 626 aaPredicted RBP16.65■□□□□ 0.26
PNKP-203ENST00000593946 TEX50A0A1B0GTY4 177 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 CFDP00746 253 aaPredicted RBP16.65■□□□□ 0.26
PNKP-203ENST00000593946 PRCDQ00LT1 54 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 SPANXN5Q5MJ07 72 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 STX12Q86Y82 276 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 THNSL2Q86YJ6 484 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 Q8N6K4 173 aa16.65■□□□□ 0.26
PNKP-203ENST00000593946 METTL1Q9UBP6 276 aaKnown RBP16.65■□□□□ 0.26
PNKP-203ENST00000593946 NAV3Q8IVL0 2385 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 CST7O76096 145 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 SULT1A1P50225 295 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 F2RL1P55085 397 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 UBA52P62987 128 aaKnown RBP16.64■□□□□ 0.25
PNKP-203ENST00000593946 TMEM267Q0VDI3 215 aaPredicted RBP16.64■□□□□ 0.25
PNKP-203ENST00000593946 PJVKQ0ZLH3 352 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 HES1Q14469 280 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 HNF4GQ14541 408 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 TMEM14EPQ6UXP3 125 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 NPBQ8NG41 125 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 STOML3Q8TAV4 291 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 OR4C12Q96R67 309 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 SMIM3Q9BZL3 60 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 COMMD5Q9GZQ3 224 aa16.64■□□□□ 0.25
PNKP-203ENST00000593946 RRHO14718 337 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 NBR2O15453 112 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 NDUFA3O95167 84 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 BRS3P32247 399 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 HOXA1P49639 335 aaPredicted RBP16.63■□□□□ 0.25
PNKP-203ENST00000593946 MMDQ15546 238 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 PRSS8Q16651 343 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 PPP1R27Q86WC6 154 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 MMD2Q8IY49 270 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 ZNF680Q8NEM1 530 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 ST8SIA2Q92186 375 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 CLCC1Q96S66 551 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 NDUFA4L2Q9NRX3 87 aa16.63■□□□□ 0.25
PNKP-203ENST00000593946 STRAPQ9Y3F4 350 aaKnown RBP16.63■□□□□ 0.25
PNKP-203ENST00000593946 ZNF469Q96JG9 3925 aaPredicted RBP16.63■□□□□ 0.25
PNKP-203ENST00000593946 METTL15P1P0C7V9 234 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 STPG2Q8N412 459 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 OR1L8Q8NGR8 309 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 HIPK2Q9H2X6 1198 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 FBXL15Q9H469 300 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 HEYLQ9NQ87 328 aaPredicted RBP16.62■□□□□ 0.25
PNKP-203ENST00000593946 OPN1MWP04001 364 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 OPN1MW2P0DN77 364 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 OPN1MW3P0DN78 364 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 EXOSC2Q13868 293 aaKnown RBP16.62■□□□□ 0.25
PNKP-203ENST00000593946 CYB5R2Q6BCY4 276 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 RPL7L1Q6DKI1 246 aaKnown RBP16.62■□□□□ 0.25
PNKP-203ENST00000593946 ZNF767PQ75MW2 155 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 HAPLN4Q86UW8 402 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 TMEM217Q8N7C4 229 aa16.62■□□□□ 0.25
PNKP-203ENST00000593946 OR5C1Q8NGR4 320 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms