RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ARID1AO14497 2285 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 CREBBPQ92793 2442 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 PPIAL4CA0A0B4J2A2 164 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 UBE2L5PA0A1B0GUS4 154 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 A0A1W2PN81 502 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 FAM157AC9JC47 383 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 HSPB1P04792 205 aaKnown RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 LIPFP07098 398 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 PPIAL4GP0DN37 164 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 FGF7P21781 194 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 CHRNA7P36544 502 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 PPT1P50897 306 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 ERHP84090 104 aaKnown RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 AKR1C1Q04828 323 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 BTN1A1Q13410 526 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 RAB31Q13636 194 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 TMEM249Q2WGJ8 235 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 ACOT6Q3I5F7 207 aaPredicted RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 ZNF506Q5JVG8 444 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 WDR25Q64LD2 544 aaPredicted RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 C1orf122Q6ZSJ8 110 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 C11orf42Q8N5U0 333 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 SLC24A4Q8NFF2 622 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 P2RX4Q99571 388 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 CLEC7AQ9BXN2 247 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 NPCDR1Q9BY65 106 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 ACTR3CQ9C0K3 210 aaPredicted RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 PATZ1Q9HBE1 687 aaKnown RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 NPVFQ9HCQ7 196 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 RPRMQ9NS64 109 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 SLC39A9Q9NUM3 307 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 FAM96BQ9Y3D0 163 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 NOTCH2Q04721 2471 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 RP1L1Q8IWN7 2480 aaPredicted RBP8.47□□□□□ -1.05
VPS25-203ENST00000589520 NBPF19A0A087WUL8 3843 aa8.47□□□□□ -1.05
VPS25-203ENST00000589520 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 M0R1W7 72 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 SCO1O75880 301 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 F12P00748 615 aaPredicted RBP8.46□□□□□ -1.06
VPS25-203ENST00000589520 IFNA4P05014 189 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 ADCYAP1P18509 176 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 NPY1RP25929 384 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 SUB1P53999 127 aaKnown RBP eCLIP8.46□□□□□ -1.06
VPS25-203ENST00000589520 RPS16P62249 146 aaKnown RBP8.46□□□□□ -1.06
VPS25-203ENST00000589520 C2orf83Q53S99 150 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 UTF1Q5T230 341 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 VKORC1L1Q8N0U8 176 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 TEX45Q8NA69 505 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 OR1L8Q8NGR8 309 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 HARBI1Q96MB7 349 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 RSG1Q9BU20 258 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
VPS25-203ENST00000589520 COMMD5Q9GZQ3 224 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 MGAQ8IWI9 3026 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 TANC2Q9HCD6 1990 aa8.46□□□□□ -1.06
VPS25-203ENST00000589520 FLNCQ14315 2725 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 TRAV3A0A0B4J244 114 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 TEX50A0A1B0GTY4 177 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 IGLV1-47P01700 117 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 GNLYP22749 145 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 MAS1LP35410 378 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 OPRK1P41145 380 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 RPL8P62917 257 aaKnown RBP8.45□□□□□ -1.06
VPS25-203ENST00000589520 HLA-DRB5Q30154 266 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 SOHLH1Q5JUK2 328 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 ZNF787Q6DD87 383 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 CLRN3Q8NCR9 226 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 CLDND2Q8NHS1 167 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 CACNG8Q8WXS5 425 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 MS4A7Q9GZW8 240 aaPredicted RBP8.45□□□□□ -1.06
VPS25-203ENST00000589520 BSNQ9UPA5 3926 aa8.45□□□□□ -1.06
VPS25-203ENST00000589520 DSCAML1Q8TD84 2053 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 USF3Q68DE3 2245 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 ICE1Q9Y2F5 2266 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 LOC105371242A0A075B767 164 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 A6NNC1 897 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 SRRM4A7MD48 611 aaKnown RBP8.44□□□□□ -1.06
VPS25-203ENST00000589520 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 LYNX1G3V0Z9 82 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 BUB1B-PAK6H3BSN5 160 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 IGKV1-16P04430 117 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 SOD3P08294 240 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 SAA1P0DJI8 122 aaPredicted RBP8.44□□□□□ -1.06
VPS25-203ENST00000589520 LYNX1P0DP58 116 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 IGFBP2P18065 325 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 GPX4P36969 197 aaPredicted RBP8.44□□□□□ -1.06
VPS25-203ENST00000589520 CEACAM3P40198 252 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 COMPP49747 757 aaPredicted RBP8.44□□□□□ -1.06
VPS25-203ENST00000589520 EFNA4P52798 201 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 GUCA2BQ16661 112 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 KIR3DL3Q8N743 410 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 OR10G9Q8NGN4 311 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 OR10G7Q8NGN6 311 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 TUBA4BQ9H853 241 aa8.44□□□□□ -1.06
VPS25-203ENST00000589520 NDUFA4L2Q9NRX3 87 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms