RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 A0A0B4J2A0 478 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 RBMXL2O75526 392 aaKnown RBP12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 OPN1MWP04001 364 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 IGF1P05019 195 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 OPN1MW2P0DN77 364 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 OPN1MW3P0DN78 364 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 MYOD1P15172 320 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 VDAC1P21796 283 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 RPL27AP46776 148 aaKnown RBP12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 PROK1P58294 105 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 ECSCRQ19T08 205 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 SGMS2Q8NHU3 365 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 CHPT1Q8WUD6 406 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 LSM10Q969L4 123 aaKnown RBP12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 PHB2Q99623 299 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 COMMD5Q9GZQ3 224 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 WNT10AQ9GZT5 417 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 SHPKQ9UHJ6 478 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 WSB1Q9Y6I7 421 aa12.18□□□□□ -0.46
RPRD1A-208ENST00000589050 FBN1P35555 2871 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 DUXBA0A1W2PPF3 345 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 MSGN1A6NI15 193 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 C15orf61A6NNL5 157 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 G3V318 75 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 DHFRP00374 187 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 IL5P05113 134 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 FGF2P09038 288 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 CENPVQ7Z7K6 275 aaPredicted RBP12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 ZNF431Q8TF32 576 aaPredicted RBP12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 MITD1Q8WV92 249 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 FYTTD1Q96QD9 318 aaKnown RBP12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 MDFIQ99750 246 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
RPRD1A-208ENST00000589050 A0A0B4J293 547 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 TEX50A0A1B0GTY4 177 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 PSMB11A5LHX3 300 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 DBX1A6NMT0 343 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 PRAF2O60831 178 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 HOXB5P09067 269 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 APELAP0DMC3 54 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 SLC35B1P78383 322 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 TMEM267Q0VDI3 215 aaPredicted RBP12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 UNQ5815/PRO19632Q6UWF5 114 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 ZNF329Q86UD4 541 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 LFNGQ8NES3 379 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 TMEM14BQ9NUH8 114 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 CACNG5Q9UF02 275 aa12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
RPRD1A-208ENST00000589050 E7EUB6 86 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 NMSQ5H8A3 153 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 C10orf99Q6UWK7 81 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 C12orf54Q6X4T0 127 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 Q6ZRM9 215 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 OR1L8Q8NGR8 309 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 WFDC12Q8WWY7 111 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 HINT2Q9BX68 163 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 TMED3Q9Y3Q3 217 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 C2CD3Q4AC94 2353 aa12.15□□□□□ -0.46
RPRD1A-208ENST00000589050 A0A1B0GW64 132 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 HMX3A6NHT5 357 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 ADAP1O75689 374 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 TRAPPC2P0DI81 140 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 TRAPPC2BP0DI82 140 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 CFHR3Q02985 330 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 KRTAP21-3Q3LHN1 58 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 AKIRIN2Q53H80 203 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 C19orf54Q5BKX5 351 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 ASPHD1Q5U4P2 390 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 GGNBP1Q5YKI7 109 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 C12orf45Q8N5I9 185 aaPredicted RBP12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 OR5AU1Q8NGC0 362 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 TMEM68Q96MH6 324 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 PDCD10Q9BUL8 212 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
RPRD1A-208ENST00000589050 A0A1B0GU03 582 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 A0A1W2PN81 502 aa12.13□□□□□ -0.47
RPRD1A-208ENST00000589050 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms