RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GAL3ST2Q9H3Q3 398 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 LRRK2Q5S007 2527 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 GFRA3O60609 400 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 CA2P00918 260 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 ARL14EPLP0DKL9 152 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 COL8A2P25067 703 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 OR10J1P30954 320 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 GALR1P47211 349 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 SERF2P84101 59 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
TOP3A-217ENST00000584582 FLYWCH2Q96CP2 140 aaKnown RBP9.36□□□□□ -0.91
TOP3A-217ENST00000584582 MBD3L4A6NDZ8 208 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 MBD3L3A6NE82 208 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 MBD3L5A6NJ08 208 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 COLCA2A8K830 154 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 USF2Q15853 346 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 SSX7Q7RTT5 188 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 NHLRC2Q8NBF2 726 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 MBD3L2Q8NHZ7 208 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 NEIL1Q96FI4 390 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 UHRF2Q96PU4 802 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF355PQ9NSJ1 428 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 JPT1Q9UK76 154 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 CHD3Q12873 2000 aaKnown RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 SPCS3P61009 180 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 LY6DQ14210 128 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 LYPD2Q6UXB3 125 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 C16orf82Q7Z2V1 217 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 MRPL41Q8IXM3 137 aaKnown RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 MRPL20Q9BYC9 149 aaKnown RBP9.35□□□□□ -0.91
TOP3A-217ENST00000584582 PARLQ9H300 379 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 F6UZH7 168 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 ARF6P62330 175 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 HTD2P86397 168 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 ZNF90Q03938 601 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 PRR31Q5SQ13 230 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 IDI2-AS1Q9NZ38 188 aa9.35□□□□□ -0.91
TOP3A-217ENST00000584582 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.34□□□□□ -0.91
TOP3A-217ENST00000584582 C17orf100A8MU93 164 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 IGFBP2P18065 325 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
TOP3A-217ENST00000584582 LINC00518Q8N0U6 118 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 Q8NFD4 153 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 Q8WTZ3 238 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 PCGF1Q9BSM1 259 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 NCBP2LA6PVI3 153 aaKnown RBP9.34□□□□□ -0.91
TOP3A-217ENST00000584582 IGKV1D-33P01593 117 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 IGKV1-33P01594 117 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 MEOX2P50222 304 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 ERVFC1-1P60608 527 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 TEPPQ6URK8 271 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 KIR3DL3Q8N743 410 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 RPEQ96AT9 228 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 TPPP3Q9BW30 176 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 GPR61Q9BZJ8 451 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 ATP6V1FQ16864 119 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 Q6ZS49 121 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 FUT9Q9Y231 359 aa9.34□□□□□ -0.91
TOP3A-217ENST00000584582 CXCL1P09341 107 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 C22orf15Q8WYQ4 148 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 DERL1Q9BUN8 251 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 TMEM106BQ9NUM4 274 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 HSPB7Q9UBY9 170 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 IL19Q9UHD0 177 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 INSIG2Q9Y5U4 225 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 ADAMTS20P59510 1910 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 AP4M1O00189 453 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 COX7A2P2O60397 106 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 IGLV2-14P01704 120 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 GRNP28799 593 aaKnown RBP9.33□□□□□ -0.92
TOP3A-217ENST00000584582 HSPE1P61604 102 aaKnown RBP9.33□□□□□ -0.92
TOP3A-217ENST00000584582 HABP2Q14520 560 aaPredicted RBP9.33□□□□□ -0.92
TOP3A-217ENST00000584582 C5orf30Q96GV9 206 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 ELOVL1Q9BW60 279 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
TOP3A-217ENST00000584582 RBP4P02753 201 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 TMEM11P17152 192 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 MBNL2Q5VZF2 373 aaKnown RBP9.33□□□□□ -0.92
TOP3A-217ENST00000584582 SPATA31B1PQ5VZV4 182 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 KCNIP4Q6PIL6 250 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 SPNS3Q6ZMD2 512 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF705FA8MVS1 300 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-217ENST00000584582 LGALS4P56470 323 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ADIPOQQ15848 244 aa9.32□□□□□ -0.92
TOP3A-217ENST00000584582 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms