RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 ZBTB8BQ8NAP8 495 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR11H7Q8NGC8 314 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR4D5Q8NGN0 318 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR52E5Q8NH55 327 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR1S1Q8NH92 325 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CHAC2Q8WUX2 184 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 DUX5Q96PT3 197 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 PRSS22Q9GZN4 317 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 COMMD5Q9GZQ3 224 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TMEM14BQ9NUH8 114 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 FOXA2Q9Y261 457 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR51B2Q9Y5P1 312 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 MTORP42345 2549 aa7.26□□□□□ -1.25
CDK5RAP3-220ENST00000581160 NSD1Q96L73 2696 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 IGHV7-81A0A0B4J1V7 117 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 FAM90A26D6RGX4 464 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TRIM77I1YAP6 450 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ST8SIA3O43173 380 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 RBMXL2O75526 392 aaKnown RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CNIH1O95406 144 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 IGHG2P01859 326 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TRAPPC2P0DI81 140 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TRAPPC2BP0DI82 140 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 MYOD1P15172 320 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CXCL3P19876 107 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 COMPP49747 757 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 H2BFSP57053 126 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR2B8PP59922 312 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SPCS3P61009 180 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SSBP2P81877 361 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 FXYD3Q14802 87 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TNXAQ16473 311 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 PDLIM3Q53GG5 364 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR1L8Q8NGR8 309 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OR5B3Q8NH48 314 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ASB13Q8WXK3 278 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 NMES1Q9C002 83 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ZNF436Q9C0F3 470 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 NPFFR1Q9GZQ6 430 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 NDUFA4L2Q9NRX3 87 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 GSKIPQ9P0R6 139 aa7.25□□□□□ -1.25
CDK5RAP3-220ENST00000581160 hCG_2014768A0A024R1R8 64 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 MSGN1A6NI15 193 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SH2D7A6NKC9 451 aaPredicted RBP7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CGB1A6NKQ9 187 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 LINC01548A6NM66 108 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 KCNAB3O43448 404 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 MED6O75586 246 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TSPAN9O75954 239 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 IFNA17P01571 189 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CRYBA1P05813 215 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 EGR2P11161 476 aaPredicted RBP7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 RPL27AP46776 148 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 BCAP31P51572 246 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 GNB1P62873 340 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 PRCDQ00LT1 54 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 C9orf152Q5JTZ5 239 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 Q6ZS46 218 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 Q8N2B8 174 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 FYTTD1Q96QD9 318 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 HSPB9Q9BQS6 159 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SRSF8Q9BRL6 282 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 PDCD10Q9BUL8 212 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 HSPB7Q9UBY9 170 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TNCP24821 2201 aa7.24□□□□□ -1.25
CDK5RAP3-220ENST00000581160 E7EUB6 86 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 INS-IGF2F8WCM5 200 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 MBPP02686 304 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OPN1MWP04001 364 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 IGF1P05019 195 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 GIPP09681 153 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OPN1MW2P0DN77 364 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 OPN1MW3P0DN78 364 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 NKX2-1P43699 371 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CRIP2P52943 208 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TNFRSF9Q07011 255 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SLC35E3Q7Z769 313 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SGMS2Q8NHU3 365 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SRSF12Q8WXF0 261 aaKnown RBP7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ARPC1AQ92747 370 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 WDR89Q96FK6 387 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TMEM68Q96MH6 324 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 RBKSQ9H477 322 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ZNF702PQ9H963 129 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ZFP57Q9NU63 452 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 ZNF580Q9UK33 172 aa7.23□□□□□ -1.25
CDK5RAP3-220ENST00000581160 PLXNB1O43157 2135 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 A0A1B0GW64 132 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 A0A1W2PN81 502 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 TEX22C9J3V5 150 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 SYNGR2O43760 224 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 NDUFA7O95182 113 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 LY86O95711 162 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 PSMB6P28072 239 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 CHRNA7P36544 502 aa7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 VDAC2P45880 294 aaPredicted RBP7.22□□□□□ -1.25
CDK5RAP3-220ENST00000581160 RAP2BP61225 183 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms