RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 OR13D1Q8NGV5 346 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 GNG13Q9P2W3 67 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 ASH1LQ9NR48 2969 aaKnown RBP16.55■□□□□ 0.24
SMG8-203ENST00000578922 FBP1P09467 338 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 G6PCP35575 357 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 GSN-AS1Q9NRJ2 163 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 FCGR3BO75015 233 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 FSTL3O95633 263 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 Q8WTZ3 238 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 NEIL1Q96FI4 390 aaPredicted RBP16.54■□□□□ 0.24
SMG8-203ENST00000578922 RSG1Q9BU20 258 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 MIOXQ9UGB7 285 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 MMP24Q9Y5R2 645 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 RAB29O14966 203 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 TGOLN2O43493 480 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 METTL15P1P0C7V9 234 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 IAPPP10997 89 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 EFNA4P52798 201 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 DLX6P56179 175 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 TMEM41BQ5BJD5 291 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 WDR25Q64LD2 544 aaPredicted RBP16.54■□□□□ 0.24
SMG8-203ENST00000578922 FAM90A2PQ658T7 463 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 LILRB2Q8N423 598 aa16.54■□□□□ 0.24
SMG8-203ENST00000578922 ITGB1BP1O14713 200 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 IFNA1P01562 189 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 GPR6P46095 362 aaPredicted RBP16.53■□□□□ 0.24
SMG8-203ENST00000578922 CDX1P47902 265 aaPredicted RBP16.53■□□□□ 0.24
SMG8-203ENST00000578922 SLC25A48Q6ZT89 311 aaKnown RBP16.53■□□□□ 0.24
SMG8-203ENST00000578922 WDR61Q9GZS3 305 aaKnown RBP16.53■□□□□ 0.24
SMG8-203ENST00000578922 TIMM9Q9Y5J7 89 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 TRBV23-1A0A0A0MS06 115 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 ARL16Q0P5N6 197 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 TMEM30BQ3MIR4 351 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 HAPLN4Q86UW8 402 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 OR10A7Q8NGE5 316 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 RCC1LQ96I51 464 aaKnown RBP16.53■□□□□ 0.24
SMG8-203ENST00000578922 VAX2Q9UIW0 290 aa16.53■□□□□ 0.24
SMG8-203ENST00000578922 RAB11AP62491 216 aa16.52■□□□□ 0.24
SMG8-203ENST00000578922 ZNF674Q2M3X9 581 aa16.52■□□□□ 0.24
SMG8-203ENST00000578922 SPOCK3Q9BQ16 436 aa16.52■□□□□ 0.24
SMG8-203ENST00000578922 ARHGAP32A7KAX9 2087 aa16.52■□□□□ 0.23
SMG8-203ENST00000578922 PPIAL4CA0A0B4J2A2 164 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 CXCL1P09341 107 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 PPIAL4GP0DN37 164 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 RND2P52198 227 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 GNB2P62879 340 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 ZNF726P1Q15940 193 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 CENPVQ7Z7K6 275 aaPredicted RBP16.51■□□□□ 0.23
SMG8-203ENST00000578922 C11orf42Q8N5U0 333 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 FAM216AQ8WUB2 273 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 SPG11Q96JI7 2443 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 IGHV1-8P0DP01 117 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 TMEM14EPQ6UXP3 125 aa16.51■□□□□ 0.23
SMG8-203ENST00000578922 PATZ1Q9HBE1 687 aaKnown RBP16.51■□□□□ 0.23
SMG8-203ENST00000578922 KMT2BQ9UMN6 2715 aaPredicted RBP16.5■□□□□ 0.23
SMG8-203ENST00000578922 ZFP92A6NM28 416 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 C22orf46C9J442 243 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 OVOL3O00110 214 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 ATP6V1FQ16864 119 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 ZNF343Q6P1L6 599 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 LCN15Q6UWW0 184 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 TAF15Q92804 592 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMG8-203ENST00000578922 OR4C12Q96R67 309 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 S1PR3Q99500 378 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 CCL19Q99731 98 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 CLDN34H7C241 214 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 NDUFS6O75380 124 aaKnown RBP16.5■□□□□ 0.23
SMG8-203ENST00000578922 SPANXN5Q5MJ07 72 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 TCTEX1D1Q8N7M0 179 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 CTDSP1Q9GZU7 261 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 VSIRQ9H7M9 311 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 ONECUT1Q9UBC0 465 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 HSPB7Q9UBY9 170 aa16.5■□□□□ 0.23
SMG8-203ENST00000578922 LINC00587B1AMM8 73 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 REG1BP48304 166 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 TNFRSF9Q07011 255 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 SLC38A11Q08AI6 406 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 SSX9Q7RTT3 188 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 VKORC1L1Q8N0U8 176 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 ZNF383Q8NA42 475 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 OR10X1Q8NGY0 326 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 SDF2L1Q9HCN8 221 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 DOK5Q9P104 306 aa16.49■□□□□ 0.23
SMG8-203ENST00000578922 IGHV4-39P01824 125 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 ABHD12Q8N2K0 398 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.48■□□□□ 0.23
SMG8-203ENST00000578922 GAB2Q9UQC2 676 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 MAP1LC3B2A6NCE7 125 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 J3QR06 171 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 CYB5BO43169 146 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 DDB2Q92466 427 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 R3HDM4Q96D70 268 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 SSBP3Q9BWW4 388 aaPredicted RBP16.48■□□□□ 0.23
SMG8-203ENST00000578922 MAP1LC3BQ9GZQ8 125 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 URGCP-MRPS24S4R325 110 aa16.48■□□□□ 0.23
SMG8-203ENST00000578922 MED13LQ71F56 2210 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 TGIF2-C20orf24A0A0A6YYL0 155 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 MARCH11A6NNE9 402 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 SEC14L6B5MCN3 397 aa16.47■□□□□ 0.23
SMG8-203ENST00000578922 P0C879 139 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms